CX045735

Overview
NameCX045735
Unique NameCX045735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX045735 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.709e-46
Identity = 110/204 (53.92%), Postives = 129/204 (63.24%), Query Frame = -1 
Query:  228 HWQPSGSVRTALVALIAFMPTNPNGALGSLDYKKEERRALAIKSREAAPKFGTPERQKLIDEIHEYMLSKAP--PVPQLSTCEEQPG-NREGEAQASSIDAMVAGAGEGLPAP---VGDRIIEEVQEDXXXXXXXXXXXAG-TSREVPANASGVQLQPKPETRVQKPADDRLFTWAAVGLTIAILVLLLRKFMKSNGHGAVFMD 818
            HWQPS SVRTALVALIAFMPT+PNGALGS+DY K+ERR LAIKSRE  PK+G+PERQK+IDEIH+Y+LSKA   P P    C + P    E  +Q    +A+       +      V D+IIEE  E            A   + EV   AS    Q       QKP DDRLFTWAAVGLTIAI+VLLL+KF+KSNG+   FMD
Sbjct:  103 HWQPSWSVRTALVALIAFMPTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSKATVVPKPLPLECSQAPSIVSEAHSQVEPQEAITVVEERSIATTDTIVDDQIIEETAEAVNTAASVVPAAAPLPAVEVVVKASVSGEQRMARRAAQKPVDDRLFTWAAVGLTIAIMVLLLKKFIKSNGYSTGFMD 306
The following BLAST results are available for this feature:
BLAST of CX045735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UBC32_ARATH4.709e-4653.92Ubiquitin carrier protein E2 32 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_3F11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-3F11-K21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045735 ID=CX045735; Name=CX045735; organism=Citrus sinensis; type=EST; length=818bp
GGACAAAGTAGCATGAAATATAGATATCCAAATTGTGTACAAAATGACAG
GACAATCTGGCTTACAATTGCGTATGAAATTACAGTCATGGGGTATAAAA
GATCATATATACGACAAACTGTTTCAATAAAGATTAATGCCCTTGATGAT
AATTTCTCCCTTAACTACTATGACTTGGAAATTTTGAACTCCCAGATTTG
ACGAAACCGATAGCATATCTACGAACCATCCATGAAAACAGCACCATGAC
CATTAGATTTCATGAATTTCCTCAGTAAAAGAACCAAAATTGCAATAGTA
AGTCCAACAGCAGCCCATGTGAACAGTCGATCATCAGCAGGTTTTTGAAC
CCTAGTCTCCGGTTTTGGCTGAAGCTGGACTCCAGAGGCGTTGGCAGGAA
CCTCTCTTGATGTTCCAGCCACTACGGGGTTGGGATTCACGCTGGCAGGA
ACATCCTCCTGAACTTCTTCAATAATCCTATCACCTACTGGGGCTGGGAG
CCCTTCCCCAGCACCCGCAACCATGGCGTCTATGGAACTTGCCTGTGCTT
CACCCTCCCTGTTGCCAGGCTGTTCTTCACAGGTGCTGAGCTGAGGGACA
GGGGGTGCCTTGCTTAACATATATTCATGGATCTCATCAATGAGTTTTTG
ACGTTCAGGAGTCCCAAATTTTGGGGCAGCTTCACGAGATTTGATGGCCA
GAGCACGCCTCTCTTCCTTCTTATAATCTAGTGAGCCCAAAGCACCATTT
GGATTGGTGGGCATGAAAGCAATTAGTGCTACAAGAGCAGTCCTCACACT
CCCAGATGGTTGCCAGTG
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