DN617798

Overview
NameDN617798
Unique NameDN617798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: CAS1_ARATH (Cycloartenol synthase OS=Arabidopsis thaliana GN=CAS1 PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 3.832e-67
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = -3
Query:  198 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCRVL 620
            FTYGTWFGVKGLVA G    NS  + KACEFLLSKQ+PSGGWGESYLSCQ KVYSNL+G+RSHVVNTAWAMLALI AGQAE D  PLHRAARYLIN+QMENGD+PQ+EIMGVFNRNCMI+Y+AYRNIFPIWALGEYRC+VL
Sbjct:  614 FTYGTWFGVKGLVAVGKTLKNSPHVAKACEFLLSKQQPSGGWGESYLSCQDKVYSNLDGNRSHVVNTAWAMLALIGAGQAEVDRKPLHRAARYLINAQMENGDFPQQEIMGVFNRNCMITYAAYRNIFPIWALGEYRCQVL 754          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LAS1_ARATH (Lanosterol synthase OS=Arabidopsis thaliana GN=LAS1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.011e-59
Identity = 104/137 (75.91%), Postives = 120/137 (87.59%), Query Frame = -3
Query:  210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYR 620
            FTY TWFG+KG++A+G  Y +S  IRKAC FLLSKQ   GGWGESYLSCQ KVY+NL G++SH+VNT+WA+LALI+AGQA  DP PLHR A+ LINSQME+GDYPQ+EI+GVFNRNCMISYSAYRNIFPIWALGEYR
Sbjct:  614 FTYATWFGIKGMLASGKTYESSLCIRKACGFLLSKQLCCGGWGESYLSCQNKVYTNLPGNKSHIVNTSWALLALIEAGQASRDPMPLHRGAKSLINSQMEDGDYPQQEILGVFNRNCMISYSAYRNIFPIWALGEYR 750          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LUP3_ARATH (Camelliol C synthase OS=Arabidopsis thaliana GN=CAMS1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.463e-50
Identity = 89/140 (63.57%), Postives = 111/140 (79.29%), Query Frame = -3
Query:  201 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCRV 620
            FTY TWFG+ GL AAG  Y+N   +RK   FLL+ Q+ +GGWGESYLSC KK Y   EG+RS++V T+WAM+ L+ AGQAE DP+PLHRAA+ LINSQ+ENGD+PQ+EI G F +NC++ Y+AYRNIFP+WAL EYR RV
Sbjct:  617 FTYSTWFGLGGLAAAGKTYNNCLAMRKGVHFLLTTQKDNGGWGESYLSCPKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFPQQEITGAFMKNCLLHYAAYRNIFPVWALAEYRRRV 756          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LUP4_ARATH (Beta-amyrin synthase OS=Arabidopsis thaliana GN=BAS PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = -3
Query:  201 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCRV 620
            FTYGTWF + GL AAG  +++   IRK  +FLL+ Q+ +GGWGESYLSC KK+Y    G+ S+VV TAWA++ LI +GQAE DP PLHRAA+ +INSQ+E+GD+PQ++  GVF +NC + Y+AYRNI P+WAL EYR RV
Sbjct:  617 FTYGTWFALAGLAAAGKTFNDCEAIRKGVQFLLAAQKDNGGWGESYLSCSKKIYIAQVGEISNVVQTAWALMGLIHSGQAERDPIPLHRAAKLIINSQLESGDFPQQQATGVFLKNCTLHYAAYRNIHPLWALAEYRARV 756          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LUP2_ARATH (Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.405e-47
Identity = 84/144 (58.33%), Postives = 105/144 (72.92%), Query Frame = -3
Query:  189 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYRCRVLEAH 620
            F Y TWF + GL AAG  Y +   +RK  +FLL+ Q   GGWGES+LSC ++ Y  LEG+RS++V TAWAM+ LI AGQAE DPTPLHRAA+ +I SQ+ENGD+PQ+EI+GVF   CM+ Y+ YRNIFP+WAL EYR      H
Sbjct:  617 FIYATWFALSGLAAAGKTYKSCLAVRKGVDFLLAIQEEDGGWGESHLSCPEQRYIPLEGNRSNLVQTAWAMMGLIHAGQAERDPTPLHRAAKLIITSQLENGDFPQQEILGVFMNTCMLHYATYRNIFPLWALAEYRKAAFATH 760          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN6_ARATH (Pentacyclic triterpene synthase 6 OS=Arabidopsis thaliana GN=PEN6 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.490e-44
Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F YGT+F V+GLVAAG  Y N   IRKA +F+L  Q   GGWGESYLSC  K Y+ LEG+R++VVNT  A++ LI  GQ E DP P+HRAA+ LINSQ++NGD+PQEEIMGVF  N M+ Y+ YRNIF +WAL  Y
Sbjct:  623 FMYGTFFAVRGLVAAGKTYQNCEPIRKAVQFILETQNVEGGWGESYLSCPNKKYTLLEGNRTNVVNTGQALMVLIMGGQMERDPLPVHRAAKVLINSQLDNGDFPQEEIMGVFKMNVMVHYATYRNIFTLWALTYY 758          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LUP1_ARATH (Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.016e-43
Identity = 79/137 (57.66%), Postives = 100/137 (72.99%), Query Frame = -3
Query:  210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYR 620
            F Y TWF + GL AAG  Y++   +R    FLL+ QR  GGWGESYLSC ++ Y   EG+RS++V T+WAM+ALI  GQAE D  PLHRAA+ +INSQ+ENGD+PQ+EI+G F   CM+ Y+ YRN FP+WAL EYR
Sbjct:  614 FIYATWFALGGLAAAGETYNDCLAMRNGVHFLLTTQRDDGGWGESYLSCSEQRYIPSEGERSNLVQTSWAMMALIHTGQAERDLIPLHRAAKLIINSQLENGDFPQQEIVGAFMNTCMLHYATYRNTFPLWALAEYR 750          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: LUP5_ARATH (Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42
Identity = 78/137 (56.93%), Postives = 101/137 (73.72%), Query Frame = -3
Query:  210 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEYR 620
            FTYGTWF + GL A G  Y+N  ++R    FLL+ Q   GGWGESY+SC ++ Y  LEG+RS+VV TAWAM+ALI AGQA+ D  PLH AA+++I SQ+ENGD+PQ+E++G     CM+ YS Y++IFP WAL EYR
Sbjct:  617 FTYGTWFALCGLAAIGKTYNNCLSMRDGVHFLLNIQNEDGGWGESYMSCPEQRYIPLEGNRSNVVQTAWAMMALIHAGQAKRDLIPLHSAAKFIITSQLENGDFPQQELLGASMSTCMLHYSTYKDIFPPWALAEYR 753          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN4_ARATH (Thalianol synthase OS=Arabidopsis thaliana GN=THAS1 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 6.161e-41
Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F YGT+F V+GLVAAG  YSN   IRKA  FLL  Q P GGWGES+LSC  K Y+ L+G+ ++VV TA A++ LI   Q E DP P+HRAA+ LINSQ++NGD+PQ+EIMG F R  M+ +  YRN F +WAL  Y
Sbjct:  622 FIYGTFFAVRGLVAAGKTYSNCEAIRKAVRFLLDTQNPEGGWGESFLSCPSKKYTPLKGNSTNVVQTAQALMVLIMGDQMERDPLPVHRAAQVLINSQLDNGDFPQQEIMGTFMRTVMLHFPTYRNTFSLWALTHY 757          
BLAST of DN617798 vs. ExPASy Swiss-Prot
Match: PEN7_ARATH (Putative pentacyclic triterpene synthase 7 OS=Arabidopsis thaliana GN=PEN7 PE=5 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.793e-40
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = -3
Query:  213 FTYGTWFGVKGLVAAGMNYSNSSTIRKACEFLLSKQRPSGGWGESYLSCQKKVYSNLEGDRSHVVNTAWAMLALIDAGQAETDPTPLHRAARYLINSQMENGDYPQEEIMGVFNRNCMISYSAYRNIFPIWALGEY 620
            F Y T+F V+GLVAAG  Y +   IR+A +FLL  Q   GGWGES+LSC  K Y +LEG++++VVNT  AM+ LI +GQ E DP P+HRAA+ LINSQMENGD+PQ+E+ GV+  N ++ Y  YRNIF +WAL  Y
Sbjct:  483 FIYATFFAVRGLVAAGKTYQSYEPIRRAVQFLLKIQNDEGGWGESFLSCPGKKYISLEGNKTNVVNTGQAMMVLIMSGQMERDPLPVHRAAKVLINSQMENGDFPQQELRGVYKMNVLLHYPTYRNIFSLWALTYY 618          
The following BLAST results are available for this feature:
BLAST of DN617798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CAS1_ARATH3.832e-6783.69Cycloartenol synthase OS=Arabidopsis thaliana GN=C... [more]
LAS1_ARATH1.011e-5975.91Lanosterol synthase OS=Arabidopsis thaliana GN=LAS... [more]
LUP3_ARATH1.463e-5063.57Camelliol C synthase OS=Arabidopsis thaliana GN=CA... [more]
LUP4_ARATH3.373e-4759.29Beta-amyrin synthase OS=Arabidopsis thaliana GN=BA... [more]
LUP2_ARATH4.405e-4758.33Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 ... [more]
PEN6_ARATH3.490e-4461.03Pentacyclic triterpene synthase 6 OS=Arabidopsis t... [more]
LUP1_ARATH1.016e-4357.66Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 ... [more]
LUP5_ARATH1.466e-4256.93Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 ... [more]
PEN4_ARATH6.161e-4157.35Thalianol synthase OS=Arabidopsis thaliana GN=THAS... [more]
PEN7_ARATH1.793e-4056.62Putative pentacyclic triterpene synthase 7 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617798 ID=DN617798; Name=DN617798; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTGAGCTAAGAGTCTTTTCTTACCTTATTCTGCTT
TCGTTTTTGTTTTTGCTGGAAACTTTGTACATCTCATTACAGCATTGAAA
GCGATAAGGAAACAAAAAAGTTGAATGGACTAGTAGAAATTGGAAAGCAT
ATGGACGATTGTAATCGAAATGGTTAAAAAGTTTACATATGAGCCTCCAA
TACTCGACATCGGTACTCTCCAAGTGCCCAAATAGGGAAAATGTTTCTAT
ATGCAGAGTAGCTGATCATACAATTCCTATTGAAGACTCCCATAATTTCC
TCCTGTGGATAATCTCCATTCTCCATTTGCGAATTTATTAAATATCTAGC
AGCACGGTGCAAAGGTGTCGGATCTGTCTCAGCCTGTCCAGCATCAATCA
GAGCCAACATAGCCCATGCTGTATTTACCACATGAGACCTATCCCCTTCA
AGATTTGAATAAACCTTTTTTTGACATGAAAGATAACTTTCTCCCCAGCC
ACCTGAAGGACGCTGTTTTGACAGCAGAAACTCACAAGCTTTACGGATGG
TAGAAGAATTGCTGTAGTTCATTCCAGCAGCCACCAAACCTTTCACCCCA
AACCATGTACCGTAAGTGAAGC
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