DN617794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_SOLLC (Histidine decarboxylase OS=Solanum lycopersicum GN=HDC PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25 Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 342 VLARYRKTLMERTKHHLGYPYNLDFDYGA-LAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 +L +Y +TL ER K+H+GYP N+ +++ A LA L F +NN GDPF + HS+ FEV VLDWFA+LWE+E +EYWGYIT+ GTEGNL Sbjct: 17 ILTQYLETLSERKKYHIGYPINMCYEHHATLAPLLQFHLNNCGDPFTQHPTDFHSKDFEVAVLDWFAQLWEIEKDEYWGYITSGGTEGNL 106
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_RHILO (Histidine decarboxylase OS=Rhizobium loti GN=hdc PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15 Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 363 TLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++ E LGYP+ DFDY L + + NNLGDPF Y V+S FE V+D+FARL+ + E WGY+TN GTEGN+ Sbjct: 16 SMQEANGCFLGYPFAKDFDYEPLWRFMSLTGNNLGDPFEPGTYRVNSHAFECDVVDFFARLFRACSCEVWGYVTNGGTEGNI 97
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_VIBHB (Histidine decarboxylase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=hdc PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14 Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY L + FSINN GD ESNY ++S FE V+ +F++L+ + + E WGYI+N GTEGNL Sbjct: 25 NVGYPESADFDYSELEKFMKFSINNCGDWREESNYKLNSFDFEKDVMRYFSQLFNIPHQESWGYISNGGTEGNL 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBY (Histidine decarboxylase OS=Acinetobacter baumannii (strain AYE) GN=hdc PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBT (Histidine decarboxylase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=hdc PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_ACIBC (Histidine decarboxylase OS=Acinetobacter baumannii (strain ACICU) GN=hdc PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_ACIB5 (Histidine decarboxylase OS=Acinetobacter baumannii (strain AB0057) GN=hdc PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_ACIB3 (Histidine decarboxylase OS=Acinetobacter baumannii (strain AB307-0294) GN=hdc PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY AL + FSINN GD SNY ++S FE V+ +FA ++++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYALNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_VIBAN (Histidine decarboxylase OS=Vibrio anguillarum GN=hdc PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.816e-13 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 372 ERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 E ++GYP + FDY L + FSINN GD ESNY ++S +FE V+ +F++L+++ N+ WGYI+N GTEGN+ Sbjct: 20 ENQYFNVGYPESAAFDYSILEKFMKFSINNCGDWREESNYKLNSFEFEKEVMRFFSQLFKIPYNDSWGYISNGGTEGNM 98
BLAST of DN617794 vs. ExPASy Swiss-Prot
Match: DCHS_KLEPL (Histidine decarboxylase OS=Klebsiella planticola GN=hdc PE=3 SV=4) HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 387 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 608 ++GYP + DFDY L + FSINN GD NY ++S FE V+++FA+L+++ E WGY+TN GTEGN+ Sbjct: 25 NIGYPESADFDYTILERFMRFSINNCGDWGEYCNYLLNSFDFEKEVMEYFAQLFKIPFEESWGYVTNGGTEGNM 98 The following BLAST results are available for this feature:
BLAST of DN617794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617794 ID=DN617794; Name=DN617794; organism=Citrus sinensis; type=EST; length=610bpback to top |