DN617792

Overview
NameDN617792
Unique NameDN617792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617792_ssr98 microsatellite DN617792_ssr98:98..107. BLAST: Citrus ESTs to Prunus persica proteins V1
DN617792_ssr586 microsatellite DN617792_ssr586:586..600. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12329 contig Csv1_Contig12329:319..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.682e-30
Identity = 56/67 (83.58%), Postives = 66/67 (98.51%), Query Frame = -3
Query:  239 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 439
            ++++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+KAAK+V+V
Sbjct:   94 DQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.333e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = -3
Query:  242 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 427
            VNRC  CRR+VGLTGFRCRCGEL+CG HRYSDRHDCS+DYKSA RDAIARENPV++AAKIVR
Sbjct:  108 VNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVR 169          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = -3
Query:  242 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 427
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = -3
Query:  242 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 427
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.436e-23
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = -3
Query:  239 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 427
            VNRC+ CR++VGLTGFRCRCGELFC  HR+S+ H+CS+DYK+AGR+ IAR NPVI+AAKI+++
Sbjct:  112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.434e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = -3
Query:  239 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 424
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.434e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = -3
Query:  239 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 424
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.434e-21
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = -3
Query:  239 SLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 544
            SL S P++   +   +G+    +++      E +  K   NRC  CR+KVGLTGF+CRCG  FC  HRY+D H C++DYK  GR+ IA++NP++KA KI ++
Sbjct:   64 SLSSTPLVTEVTDGGSGSVADGKQVM-----EEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.423e-21
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = -3
Query:  239 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 562
            K ++ K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DN617792 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 7.082e-21
Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = -3
Query:  239 EANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 451
            E N ++R  NRC+ CR++VGLTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct:  101 EQNQQQRP-NRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
The following BLAST results are available for this feature:
BLAST of DN617792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP5_ARATH1.682e-3083.58Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ1.333e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ2.273e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI2.273e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ4.436e-2369.84Zinc finger AN1 domain-containing stress-associate... [more]
SAP8_ORYSJ2.434e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI2.434e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ORYSJ2.434e-2143.14Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE5.423e-2145.37AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
SAP6_ARATH7.082e-2159.15Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L04_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617792 ID=DN617792; Name=DN617792; organism=Citrus sinensis; type=EST; length=621bp
CCACAATAATCTCTTTTCATTCTCTGAAGAAACAAACTCTAGAAAAGAAA
GAAAATTATAAATTATCGAAAGAGAAACAATTCATAAATCTGATCAACTC
TCTCTCTAAAACCCTCTTTCGATCCTTTGATCACCATATTCCTGAGGAAG
AGATCTGGCGAAATGACATCGTTTCATGATGTGTATAAATTGATCTGAAT
TTTTGACCTTTCAATCGTGTTTTCAAATTAAGCTTTCAAACTCTAACGAT
CTTGGCAGCTTTGATCACCGGATTTTCTCTCGCGATGGCGTCGCGACCGG
CCGATTTATAATCATAGCTGCAATCGTGACGATCGGAGTACCGATGTTCG
CCGCAGAACAGCTCCCCGCAGCGACATCTAAATCCGGTCAATCCAACCTT
TCGTCGACAACCGGAGCACCGATTCACAACTCGTTTCTCTACGTTGGCTT
CCTTCTCTCGCCGATCCGTCAACTCCTGATTTTGACCGGTCGTACCGGCA
GCATCGGATGACCCAGACCGGATGATAGGCCGAGATCTCAAAGATTTCTC
GCTAGAAAACTTTATGATCGCTACACCCGCTTCCTCCGCCGCCGCCGCCG
CCCGTACTCGAACCAGCAACG
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