DN617791

Overview
NameDN617791
Unique NameDN617791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5855 contig Csv1_Contig5855:35..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 2.680e-66
Identity = 118/167 (70.66%), Postives = 141/167 (84.43%), Query Frame = 2
Query:   71 MATDTAVAEHRSSNNG--HGCCAKG-PGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            MAT+T V    + +NG   GCC  G PGYATPL AMSGP EKL+YVT +YTGTG +KPDYLATVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD+S  RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I  KTGL++PHTAHCLA+G+ILVS
Sbjct:    1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVS 167          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.168e-53
Identity = 91/146 (62.33%), Postives = 114/146 (78.08%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C + GPGY +PLDAM GPRE+++Y+ C+Y  TG  KPDYLATVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGDSS  R  L+LP L+S RIY+VD   +PRAP +HK VEP ++  K GL+ PHT+HCL  G+I++S
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMIS 149          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 4.438e-53
Identity = 90/146 (61.64%), Postives = 114/146 (78.08%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYLATVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+  R  L+LP L+S RIY+VD    PRAP LHKV+E ++I  K  +S  HT+HCLASG+++VS
Sbjct:    5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVS 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 7.569e-53
Identity = 91/146 (62.33%), Postives = 114/146 (78.08%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYLATVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  LVLPSL+S RIY+VD    PRAP LHKV+EP DI  K  L++ HT+HCLASG++++S
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMIS 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 9.886e-53
Identity = 89/146 (60.96%), Postives = 113/146 (77.40%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGY TPL+AM GPRE+++Y+ C+Y  TG E PDYLATVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GDS+  R  L+LP L+S RIY+VD    PRAP LHKV+E ++I  K  +S  HT+HCLASG+++V+
Sbjct:    5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVN 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 9.886e-53
Identity = 90/146 (61.64%), Postives = 114/146 (78.08%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGYATPL+AM GPRE+++Y+ C+Y  TG E PDYLATVD DP S  YS+VIHRLP+P++ DELHHSGWN+CSSC+GDS+  R  L+LPS++S RIY+VD    PRAP LHKV+EP +I  K  L   HT+HCLASG++++S
Sbjct:    5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMIS 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.291e-52
Identity = 92/146 (63.01%), Postives = 115/146 (78.77%), Query Frame = 2
Query:  128 CAK-GPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C K GPGY +PL+AM GPRE+L+Y+ C+Y  TG E PDYLATVD +P S  YS+VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  L+LPSL+S R+Y+VD    PRAP LHKVVEP +I  K  LSY HT+HCLASG++++S
Sbjct:    5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMIS 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.757e-52
Identity = 89/146 (60.96%), Postives = 113/146 (77.40%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C + GPGY +PLDAM GPRE+++Y+ C+Y  TG  KPDYLATVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGDSS  R  L+LP L+S R+Y+VD   +PRAP LHK VEP ++  K GL+  HT+HCL  G+I++S
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMIS 149          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.369e-52
Identity = 89/146 (60.96%), Postives = 112/146 (76.71%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGY TPLDAM GPRE+++Y+ C+Y  T  +KPDYLATVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R  L+LPSL+S RIY+VD   +PRAP LHK VEP D+  K GL+ PHT+HCL SG I++S
Sbjct:    5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMIS 150          
BLAST of DN617791 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.093e-51
Identity = 90/146 (61.64%), Postives = 113/146 (77.40%), Query Frame = 2
Query:  125 CCAKGPGYATPLDAMSGPREKLLYVTCLYTGTGREKPDYLATVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVS 562
            C   GPGY+TPL+AM GPRE+++Y+ C+Y  TG E PDYLATVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GDS+  R  LVLPSL+S RIY+VD    PRA  LHKV+EP DI  K  L++ HT+HCLASG++++S
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMIS 150          
The following BLAST results are available for this feature:
BLAST of DN617791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SBP_ARATH2.680e-6670.66Putative selenium-binding protein OS=Arabidopsis t... [more]
SBP1A_XENLA1.168e-5362.33Selenium-binding protein 1-A OS=Xenopus laevis GN=... [more]
SBP1_MOUSE4.438e-5361.64Selenium-binding protein 1 OS=Mus musculus GN=Sele... [more]
SBP1_HUMAN7.569e-5362.33Selenium-binding protein 1 OS=Homo sapiens GN=SELE... [more]
SBP2_MOUSE9.886e-5360.96Selenium-binding protein 2 OS=Mus musculus GN=Sele... [more]
SBP1_RAT9.886e-5361.64Selenium-binding protein 1 OS=Rattus norvegicus GN... [more]
SBP1_BOVIN1.291e-5263.01Selenium-binding protein 1 OS=Bos taurus GN=SELENB... [more]
SBP1B_XENLA3.757e-5260.96Selenium-binding protein 1-B OS=Xenopus laevis GN=... [more]
SBP1_DANRE8.369e-5260.96Selenium-binding protein 1 OS=Danio rerio GN=selen... [more]
SBP1_PONAB1.093e-5161.64Selenium-binding protein 1 OS=Pongo abelii GN=SELE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617791 ID=DN617791; Name=DN617791; organism=Citrus sinensis; type=EST; length=562bp
ATTCGCTTCCTATCTTGATCTTTCTTCAAAGTCTTTGTGTTGTTCTGTCT
GTGTTTTTTTCTTGTAAGAAATGGCAACTGATACTGCGGTGGCTGAACAC
CGGTCGAGCAATAATGGCCATGGTTGCTGCGCGAAAGGGCCTGGGTATGC
AACTCCACTCGATGCCATGTCTGGTCCTAGAGAGAAACTTCTCTATGTCA
CTTGTCTTTACACTGGTACTGGAAGAGAGAAGCCTGATTACCTAGCGACA
GTGGATGCGGATCCTAGCTCTTCTTCTTATTCAAAAGTTATTCATCGGCT
CCCTGTGCCATACATTGGCGATGAACTACATCATTCGGGATGGAATTCAT
GTAGCTCATGCTATGGAGATTCATCTGCTCAACGGCGTTTTCTTGTCTTG
CCTTCTTTGGTATCTGGTCGTATATACATAGTTGACACACAAAAAAATCC
AAGGGCTCCCTCTTTGCATAAAGTTGTTGAGCCTGCAGATATTGTACAGA
AGACAGGATTATCTTATCCTCACACGGCTCATTGCCTTGCTTCTGGTGAT
ATCCTGGTGTCA
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