CX045688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: AB1F_ARATH (ABC transporter F family member 1 OS=Arabidopsis thaliana GN=ABCF1 PE=1 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 3.093e-95 Identity = 180/248 (72.58%), Postives = 193/248 (77.82%), Query Frame = 2 Query: 155 QISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKE----------------------------------AEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 QISDRTCTGVLCSHP SRDIRIESLSVTFHG+DLIVDS LE CGKSTLLTAIG RE+PIPD MDIYHLS EIEA+DMSSLEAV+SCDEERL+LEKE AEIL+GLGF+K MQAKKT+DFSGGWRMRIALARALFI PTILLLDEPTNHLDLEACVWLEE+LKNFDRILVV+SHSQDFLNGVCTNIIHMQ+K+LK+YTGNFDQY Sbjct: 50 QISDRTCTGVLCSHPQSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQMDIYHLSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVQQDDGGGERLQSIYERLDAMDAETAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTNHLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFDQY 297
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ABCF2_HUMAN (ATP-binding cassette sub-family F member 2 OS=Homo sapiens GN=ABCF2 PE=1 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 5.313e-71 Identity = 139/244 (56.97%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 167 RTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKEAE---------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYV 799 R TGVL SHP S D+ I +LS+TFHG +L+ D++LE GKS LL+AIG RE+PIP+H+DIYHL+RE+ SD + L V+ D ER LEKEAE IL+GLGF MQ KK +DFSGGWRMR+ALARALFI P +LLLDEPTNHLDL+ACVWLEE LK F RILV++SHSQDFLNGVCTNIIHM NKKLK+YTGN+DQYV Sbjct: 71 RAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLHCVMEVDTERAMLEKEAERLAHEDAECEKLMELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYV 314 HSP 2 Score: 70.0922 bits (170), Expect = 1.626e-11 Identity = 49/168 (29.17%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 323 GKSTLLTAIGCRELPIP------DHMDI----YHLSREIEASDMSSLEAVISCDEERLKLEKEAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 GKSTLL + LP H+ I HL +++ D+S LE ++ C E + E+ +I+ G Q R+ S G + R+ LA + NP +L LDEPTNHLD+E L + + F+ ++++SH + V I + + + + G+ Y Sbjct: 435 GKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDL-DLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAY 601
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ABCF2_MOUSE (ATP-binding cassette sub-family F member 2 OS=Mus musculus GN=Abcf2 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.019e-70 Identity = 137/244 (56.15%), Postives = 164/244 (67.21%), Query Frame = 2 Query: 167 RTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKEAE---------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYV 799 R TGVL SHP S D+ I +LS+TFHG +L+ D++LE GKS LL+AIG RE+PIP+H+DIYHL+RE+ S+ + L+ V+ D ER LE+EAE IL+GLGF MQ KK +DFSGGWRMR+ALARALFI P +LLLDEPTNHLDL+ACVWLEE LK F RILV++SHSQDFLNGVCTNIIHM NKKLK+YTGN+DQYV Sbjct: 76 RAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSEKTPLQCVMEVDTERAMLEREAERLAHEDAECEKLMELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYV 319 HSP 2 Score: 70.0922 bits (170), Expect = 1.626e-11 Identity = 49/168 (29.17%), Postives = 80/168 (47.62%), Query Frame = 2 Query: 323 GKSTLLTAIGCRELPIP------DHMDI----YHLSREIEASDMSSLEAVISCDEERLKLEKEAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 GKSTLL + LP H+ I HL +++ D+S LE ++ C E + E+ +I+ G Q R+ S G + R+ LA + NP +L LDEPTNHLD+E L + + F+ ++++SH + V I + + + + G+ Y Sbjct: 440 GKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDL-DLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAY 606
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ABCF2_BOVIN (ATP-binding cassette sub-family F member 2 OS=Bos taurus GN=ABCF2 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.019e-70 Identity = 138/244 (56.56%), Postives = 163/244 (66.80%), Query Frame = 2 Query: 167 RTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKEAE---------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYV 799 R TGVL SHP S D I +LS+TFHG +L+ D++LE GKS LL+AIG RE+PIP+H+DIYHL+RE+ SD + L+ V+ D ER LE+EAE IL+GLGF MQ KK +DFSGGWRMR+ALARALFI P +LLLDEPTNHLDL+ACVWLEE LK F RILV++SHSQDFLNGVCTNIIHM NKKLK+YTGN+DQYV Sbjct: 73 RAVTGVLASHPNSTDAHIINLSLTFHGQELLSDTKLELNSGRRYGLIGLNGIGKSMLLSAIGKREVPIPEHIDIYHLTREMPPSDKTPLQCVMEVDTERAMLEREAERLAHEDAECEKLLELYERLEELDADKAEMRASRILHGLGFTPAMQRKKLKDFSGGWRMRVALARALFIRPFMLLLDEPTNHLDLDACVWLEEELKTFKRILVLVSHSQDFLNGVCTNIIHMHNKKLKYYTGNYDQYV 316 HSP 2 Score: 70.4774 bits (171), Expect = 1.245e-11 Identity = 49/168 (29.17%), Postives = 81/168 (48.21%), Query Frame = 2 Query: 323 GKSTLLTAIGCRELPIP------DHMDI----YHLSREIEASDMSSLEAVISCDEERLKLEKEAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 GKSTLL + LP H+ I HL +++ D+S LE ++ C E + E+ +I+ G Q R+ S G + R+ LA + NP +L LDEPTNHLD+E L + + +F+ ++++SH + V I + + + + G+ Y Sbjct: 437 GKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLQEQLDL-DLSPLEYMMKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCLAWLAWQNPHMLFLDEPTNHLDIETIDALADAINDFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWPGDILAY 603
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ABCF2_DICDI (ABC transporter F family member 2 OS=Dictyostelium discoideum GN=abcF2 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.572e-59 Identity = 115/245 (46.94%), Postives = 150/245 (61.22%), Query Frame = 2 Query: 170 TCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLK-----------------------------------LEKEAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYV 799 T TG L S SRD++IE +++TFHG +L+ D+ +E CGKST + RELPIP+H+DI+HLS E S+ ++L++VI E+ +K + + +EIL GLGF KKT+D SGGWRMR++LA+ALFI PT+LLLDEPTNHLDL ACVWLE+ L N+DR L++ISHSQDFLN VCTNIIHM KLK+Y GN+D +V Sbjct: 39 TATGALASKESSRDVKIEQVTLTFHGKELLSDTTVEINFGRRYGLIGQNGCGKSTFFQCLAVRELPIPEHIDIFHLSEEAHPSERTALQSVIDDAEKEVKRLEVLEERLLEEQGPESEELFDVYERLENLDPTTFVPRASEILIGLGFTSQTMLKKTKDLSGGWRMRVSLAKALFIKPTLLLLDEPTNHLDLGACVWLEDYLANYDRSLIIISHSQDFLNAVCTNIIHMTQSKLKYYGGNYDNFV 283
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ARB1_YEAST (ABC transporter ATP-binding protein ARB1 OS=Saccharomyces cerevisiae GN=ARB1 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57 Identity = 121/248 (48.79%), Postives = 150/248 (60.48%), Query Frame = 2 Query: 158 ISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKL-----------------------------------EKEAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 +SDR TGVL S SRDI++ S+S+ FHG LI DS LE CGKST L A+ RE PIP+H+DIY L E S++S+L+ V++ + LK + A IL GLGFNK KKT+D SGGW+MR+ALA+ALF+ PT+LLLD+PT HLDLEACVWLEE LK FDR LV++SHSQDFLNGVCTN+I M+ +KL Y GN+D Y Sbjct: 64 LSDRVVTGVLSSLETSRDIKLSSVSLLFHGKVLIQDSGLELNYGRRYGLLGENGCGKSTFLKALATREYPIPEHIDIYLLDEPAEPSELSALDYVVTEAQHELKRIEDLVEKTILEDGPESELLEPLYERMDSLDPDTFESRAAIILIGLGFNKKTILKKTKDMSGGWKMRVALAKALFVKPTLLLLDDPTAHLDLEACVWLEEYLKRFDRTLVLVSHSQDFLNGVCTNMIDMRAQKLTAYGGNYDSY 311
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: YBP8_SCHPO (Uncharacterized ABC transporter ATP-binding protein C16H5.08c OS=Schizosaccharomyces pombe GN=SPBC16H5.08c PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.113e-52 Identity = 113/250 (45.20%), Postives = 155/250 (62.00%), Query Frame = 2 Query: 158 ISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERL-KLEKEAE----------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKK-LKFYTGNFDQYV 799 I +R+ +GVL S P+SRDI+I+S +++FHG LI ++ +E GKST L ++ R++ P+H+D Y L+ E E SD+++++ +I ++++ KLE E E IL+GLGF + M AK T+D SGGWRMR+AL+RALFI P++LLLDEPTNHLDLEA VWLE L +D+ILVV SHSQDFLN VCTNII + +KK L +Y GNFD Y+ Sbjct: 58 IFERSASGVLTSQPMSRDIKIDSYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHIDSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLEAEIEELSTADDVDDVLLESKYEELDDMDPSTFEAKAAMILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLEAVVWLENYLAKYDKILVVTSHSQDFLNNVCTNIIDLTSKKQLVYYGGNFDIYM 307
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana GN=ABCF4 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 99/244 (40.57%), Postives = 136/244 (55.74%), Query Frame = 2 Query: 206 RDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKEAE-----------------------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQY 796 +DI IES SV+ G +L+ ++ + GKSTLL + R++P+P ++D+ + +E+ + S+L AV+S +EE +KL +EAE IL GLGF K MQ + T+ FSGGWRMRI+LARALF+ PT+LLLDEPTNHLDL A +WLEE L + + LVV+SH +DFLN VCT IIH+ ++ L FY GNFD + Sbjct: 161 KDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDEKSALNAVVSANEELVKLREEAEALQKSSSGADGENVDGEDDDDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKDMQVRATQSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDQNLHFYRGNFDGF 404
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: YJQ1_SCHPO (Uncharacterized ABC transporter ATP-binding protein C825.01 OS=Schizosaccharomyces pombe GN=SPCC825.01 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.589e-43 Identity = 105/247 (42.51%), Postives = 138/247 (55.87%), Query Frame = 2 Query: 170 TCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLK-----------------------------LEKEA------EILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKN--FDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNFDQYV 799 T TG L S P SRD+++E LSV+ G LI DSEL GKSTLL AI C +P P +D Y L RE ++++ +EAV+ +E+ K LE E +IL GL F M AK+T + SGGWRMRIALAR LFI PT+++LDEPTNHLDLEA WLEE L + L++ H+QD LN VCT+IIH+ ++KL +Y+GN+D ++ Sbjct: 262 TVTGNLLSPPNSRDLQVEKLSVSAWGKLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELTCVEAVLDINEQERKHLEAMMEDLLDDPDKNAVELDTIQTRLTDLETENSDHRVYKILRGLQFTDEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLEAVAWLEEYLTHEMEGHTLLITCHTQDTLNEVCTDIIHLYHQKLDYYSGNYDTFL 508
BLAST of CX045688 vs. ExPASy Swiss-Prot
Match: ABCF1_RAT (ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus GN=Abcf1 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.004e-39 Identity = 85/231 (36.80%), Postives = 130/231 (56.28%), Query Frame = 2 Query: 209 DIRIESLSVTFHGHDLIVDSELEXXXXXXXXXXXXXXCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSSLEAVISCDEERLKLEKEAE--------------------------------------ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKFYTGNF 787 DI++E S++ HG +L V+++L GK+TLL I R L IP ++D+ +E+ A + +++AV+ D +RL+L +E + IL GLGF+ MQ + T+ FSGGWRMR++LARALF+ PT+L+LDEPTNHLDL A +WL L+ + + L+++SH Q FL+ VCT+IIH+ ++L +Y GN+ Sbjct: 297 DIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRLLEEEKRLQGQLEQGDDTAAEKLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRGNY 527 The following BLAST results are available for this feature:
BLAST of CX045688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX045688 ID=CX045688; Name=CX045688; organism=Citrus sinensis; type=EST; length=799bpback to top |