DN617771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2) HSP 1 Score: 348.977 bits (894), Expect = 1.789e-95 Identity = 176/226 (77.88%), Postives = 188/226 (83.19%), Query Frame = 3 Query: 117 MGSLKNETGNEVNQREQEDQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 MGSLK G ++ + E E EP+LM QNQRF MFPIRYK +WEMYKKAEASFWTAEEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLAARFLND+Q+PEARAFYGFQIAMENIHSEMYSLLLET+IKDSKEK RLFNAIE IPC+++KAKW LDWI S PM SFA RLV FACVEGIFFSGSFCAIFWL KRGLMPGLTFSNEL Sbjct: 1 MGSLKEGQGRDMEEGESE--EPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQS-----------PM----SFAVRLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 209
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 6.602e-82 Identity = 148/207 (71.50%), Postives = 164/207 (79.23%), Query Frame = 3 Query: 174 QEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 +EP+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDLS D +HWE L E+HFI+HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+YIKDS EK RLF A+E PCV +KAKWAL WI S +FAERLV FACVEGIFFSGSFCAIFWL KRGLMPGLTFSNEL Sbjct: 6 EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSRLFRAVETNPCVEKKAKWALRWID---------------GSETFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 197
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 1.921e-81 Identity = 147/208 (70.67%), Postives = 168/208 (80.77%), Query Frame = 3 Query: 174 QEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLL-DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 +EP+L RFCMFPI Y Q+WEMYKKAEASFWTAEEVDLSQD + WE L D E+HFI HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+KE+ LF AIE IPCVA+KA+WA+ WI S +FAER++ FACVEGIFFSGSFC+IFWL KRGLMPGLTFSNEL Sbjct: 6 EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKKAQWAMKWID---------------GSQTFAERIIAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNEL 198
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2B_ARATH (Putative ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 3.276e-81 Identity = 148/208 (71.15%), Postives = 168/208 (80.77%), Query Frame = 3 Query: 174 QEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWER-LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 +EPIL RFCMFPI+Y Q+WEMYKKAEASFWTAEEVDLSQD + WE L + E+HFI HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TYIKD+KE+ LF AIE IPCV +KA+WA+ WI+ S SFAER+V FACVEGIFFSGSFC+IFWL KRGLMPGLTFSNEL Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVTKKAEWAMKWIN---------------GSQSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNEL 198
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_MESAU (Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus auratus GN=RRM2 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 8.351e-77 Identity = 140/220 (63.64%), Postives = 165/220 (75.00%), Query Frame = 3 Query: 135 ETGNEVNQREQEDQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 E ++V+ + EP+L E +RF +FPI Y +W+MYKKAEASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL WI +++ ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 57 EPESKVSTNPSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGD--------------KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 262
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.425e-76 Identity = 138/208 (66.35%), Postives = 161/208 (77.40%), Query Frame = 3 Query: 171 DQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 ++EP+L E +RF +FPI Y +W+MYKKAEASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL WI +++ ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 69 EEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGD--------------KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 262
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_DANRE (Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio GN=rrm2 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.430e-76 Identity = 137/208 (65.87%), Postives = 163/208 (78.37%), Query Frame = 3 Query: 171 DQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 ++EP+L E RF +FPI+Y +W+MYKKAEASFWTAEEVDLS+D+QHW+ L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKDSKE+ LFNAIE +PCV +KA WAL+WI ++ + ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 65 EEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGD--------------KNARYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 258
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus GN=Rrm2 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 9.233e-76 Identity = 137/208 (65.87%), Postives = 159/208 (76.44%), Query Frame = 3 Query: 171 DQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 + EP+L E +RF +FPI Y +W+MYKKAEASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI +++ ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 69 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGD--------------KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 262
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_MACFA (Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca fascicularis GN=RRM2 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.582e-75 Identity = 137/208 (65.87%), Postives = 159/208 (76.44%), Query Frame = 3 Query: 171 DQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 + EP+L E +RF +FPI Y +W+MYKKAEASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI +++ ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVEKKADWALRWIGD--------------KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 261
BLAST of DN617771 vs. ExPASy Swiss-Prot
Match: RIR2_HUMAN (Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.582e-75 Identity = 137/208 (65.87%), Postives = 159/208 (76.44%), Query Frame = 3 Query: 171 DQEPILMEQNQRFCMFPIRYKQLWEMYKKAEASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIENIPCVARKAKWALDWIHS*CKGRSVISLCPMCSSSSFAERLVGFACVEGIFFSGSFCAIFWLXKRGLMPGLTFSNEL 794 + EP+L E +RF +FPI Y +W+MYKKAEASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TYIKD KE+ LFNAIE +PCV +KA WAL WI +++ ER+V FA VEGIFFSGSF +IFWL KRGLMPGLTFSNEL Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGD--------------KEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNEL 261 The following BLAST results are available for this feature:
BLAST of DN617771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617771 ID=DN617771; Name=DN617771; organism=Citrus sinensis; type=EST; length=795bpback to top |