DN617729

Overview
NameDN617729
Unique NameDN617729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN617729 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.005e-49
Identity = 110/234 (47.01%), Postives = 140/234 (59.83%), Query Frame = 1 
Query:    1 LSLDSKFEACAPRTCGNDLIISYPFWISAEQEPFCGYPNFGITCND--KNPVLTISHYDYIIKDIFYPNTSLLVANSLVYEESCQTPLQNLTLDRTPFNFS-SNTDLFIWYNCTENPPQ-YDTYPINCYSNATL-HSFAGFHKDVL-VEANYSFESCQSFAYAPVHLDNGVDLASLGSMNYTEILKMGFLLNWTAHSCSNCEASGGRCGFSNNEFVCFCEDRPHLR-TCDDGNS 681
            LSLD KF+AC P++CG    ISYPF++S +QE FCGYP+F +TC+D  K PVL IS  +Y+IK+I Y   S  V NS    + C  PL NLTL RTPF  + S+ +  I YNC+++  + + TYP+ C  N +L  SF  F +  L  E   +  SCQ     PV   N  D+     M Y EILK GF+LNWTA+SC  C  SGGRCG    EFVC C D P L  TC +G +
Sbjct:   25 LSLDPKFKACEPKSCGKGPQISYPFYLSGKQESFCGYPSFELTCDDEEKLPVLGISGEEYVIKNISYLTQSFQVVNSKASHDPCPRPLNNLTLHRTPFFVNPSHINFTILYNCSDHLLEDFRTYPLTCARNTSLLRSFGVFDRKKLGKEKQIASMSCQKLVDVPVLASNESDVMG---MTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQEFVCLCPDGPKLHDTCTNGKN 255
[Close]
BLAST of DN617729 vs. ExPASy Swiss-Prot
Match: Y1838_ARATH (Uncharacterized protein At1g18380 OS=Arabidopsis thaliana GN=At1g18380 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 63/238 (26.47%), Postives = 104/238 (43.70%), Query Frame = 1 
Query:    4 SLDSKFEACAPR--TCGNDLII----SYPFWISAEQEPFCGYPNFGITCN-DKNPVLTISHYDYIIKDIFYPNTSLLVANSLVYEESCQTPLQNLTLDRTPFNFSSNTDLF-IWYNCTENPPQYDTYPINCYSNATLHSFAGFHKDVLVEANYSFESCQSFAYAPVHLDNGVDLASLGSMNYTEILKMGFLLNWTAH--SCSNCEASGGRCG--FSNNEFVCFCEDRPHLRTCDDGNS 681
            S D ++E C  R  TCG+   +    +YPFW    +  FCG+ +F ++C  D+N  L I +    +      +  + VA+  + +  C   + N    +  F   SNT+   ++ NC+   P   +   +     T H         ++ ++ S E C  +A  P+ L +  D      + + E L+ GF L +     +C  C  SGG CG    +  F C C DRPH  +CDD  +
Sbjct:   23 SADQQYEECRSRNLTCGSGHRVFESTTYPFWGGFNKPKFCGHSSFKLSCEGDQNLTLAIGNITLRVVSANLEDHKISVADDSLLDGGCLN-IWNFN-GKNQFTLDSNTETIDVFVNCSGVAPLQISCEESYEDPVTYH---------VLRSSDSDEGCMKYAEIPM-LRSAKDELQRSELTFVEALRKGFDLRYIMEDKACRRCIDSGGICGSALDSESFRCLCADRPHNSSCDDNTN 248
The following BLAST results are available for this feature:
BLAST of DN617729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y1839_ARATH2.005e-4947.01Probable serine/threonine-protein kinase At1g18390... [more]
Y1838_ARATH1.894e-1526.47Uncharacterized protein At1g18380 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01J19_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001J19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617729 ID=DN617729; Name=DN617729; organism=Citrus sinensis; type=EST; length=692bp
CTTTCTCTTGACTCCAAATTCGAGGCTTGTGCCCCAAGAACATGCGGCAA
CGACCTCATAATAAGCTACCCTTTTTGGATTTCTGCAGAACAAGAACCCT
TCTGTGGCTATCCAAACTTTGGGATCACCTGTAATGACAAAAACCCTGTA
CTTACCATTTCTCATTATGATTACATCATTAAAGATATCTTCTATCCTAA
CACTTCACTTCTTGTGGCCAATTCTTTGGTCTATGAAGAATCATGTCAAA
CTCCTCTTCAGAATCTTACTCTTGACCGAACTCCTTTCAATTTTAGTAGT
AATACAGATCTTTTTATCTGGTACAACTGCACTGAGAATCCTCCTCAGTA
CGATACGTATCCTATAAATTGTTATAGTAATGCTACACTCCATTCTTTTG
CCGGTTTTCACAAGGATGTGTTGGTGGAGGCAAACTATTCATTCGAGTCG
TGCCAGTCTTTTGCGTACGCACCTGTGCATCTAGATAATGGTGTTGATTT
GGCTAGTTTGGGGTCAATGAATTACACTGAAATTTTAAAGATGGGGTTCC
TCTTGAATTGGACTGCACATAGTTGCAGCAATTGTGAGGCAAGTGGTGGA
CGCTGTGGATTCAGTAATAATGAATTTGTTTGCTTTTGCGAAGATAGACC
TCATCTCAGAACATGTGATGATGGTAACTCTTCAGTGCATTC
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