EY679046

Overview
NameEY679046
Unique NameEY679046
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679046 vs. ExPASy Swiss-Prot
Match: GOS11_ARATH (Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.658e-65
Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = 2 
Query:  182 QEFYRLRSSLKAKQEHASLLEDFREFDRTKLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQATLGALAFLRSTFGGINFKLSNVSSRLPSVNQILSSIKEEK 502
            QEFYR RSSL+AKQEHASLLEDFREFDRT+LDLEDG GS EQAL+KEH  INR+T QMD VISQAQATLG L F RSTFGGIN KLSNV+SRLP+VN IL++IK +K
Sbjct:   93 QEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFGGINSKLSNVASRLPTVNTILAAIKRKK 198

HSP 2 Score: 94.3597 bits (233), Expect = 1.658e-65
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 3 
Query:    3 KGSTKVDAAENDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQ 179
            K  +K D  E+DLE+GID LL+QLQQVN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQ
Sbjct:   35 KALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQ 93

HSP 3 Score: 35.8094 bits (81), Expect = 1.658e-65
Identity = 18/24 (75.00%), Postives = 20/24 (83.33%), Query Frame = 3 
Query:  492 KRKKSMDTIILALETSVSTFLNFI 563
            KRKKSMDTIIL+L  +V TFL FI
Sbjct:  195 KRKKSMDTIILSLVAAVCTFLIFI 218
The following BLAST results are available for this feature:
BLAST of EY679046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GOS11_ARATH1.658e-6579.44Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-E03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679046 ID=EY679046; Name=EY679046; organism=Citrus sinensis; type=EST; length=894bp
CTAAGGGTTCTACAAAGGTTGACGCCGCAGAGAATGATCTTGAATCTGGG
ATAGATTGGTTGCTGAAACAGCTACAACAAGTAAATATACAAATGCAAGA
TTGGGTATCGTCAGGAGGATCCGAAATGGTTTCACATACTTTGACTCGTC
ATCAGGAAATTCTTCAAGATCTTACTCAGTGCAGGAGTTTTATCGTCTCC
GCTCCAGCCTTAAAGCTAAGCAAGAGCATGCTTCGCTACTTGAGGACTTT
AGGGAGTTTGATCGGACCAAATTAGATTTAGAAGATGGTGTTGGTTCTCC
AGAGCAAGCTTTACTTAAAGAACACGCGACTATTAATCGAAGTACAGGAC
AAATGGATTCTGTGATTTCTCAAGCTCAAGCAACTCTCGGTGCTCTGGCC
TTTCTACGTTCAACATTTGGGGGCATCAATTTCAAGCTCAGCAATGTTAG
CAGTCGACTCCCATCGGTAAATCAAATCCTCTCATCAATAAAAGAGGAAA
AAGTCTATGGACACAATCATACTTGCCCTTGAAACATCTGTAAGCACCTT
TCTAAATTTTATCAACAGGGATGACCAAGGTGAAAATGGGTTGAATATCA
ACGTGGTTACTGATTCTTCCGACTATTGGAAGGCCATGGGTCACCGTGTT
GTTTCAAGGGAGAAAAAATTTCGGGTTGGGGGGGAGTTTTATGTCCTTTC
TGAGAAAACAAAATTAAAAATGACAAGAAAAAAAGGTCAAACTAAATAGG
GAGGAAAACAAGAACACAAATTATGGGGAAGAATAAAAAGTTCCGGCTGA
AAAAAACATTTTTTTAATAGGCAGGCTATCACGTCCTTTTTCTCAAAATA
GTTCAGGTTCATATTCGGTAAGTAAGAAAAATATAATAGAATAG
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