DN617622

Overview
NameDN617622
Unique NameDN617622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.342e-41
Identity = 77/100 (77.00%), Postives = 92/100 (92.00%), Query Frame = -2
Query:  254 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 553
            PL+PL+GLLKSQGK++++G P+KPLELP FPLL GRKI+ GS IGG+KETQEMIDFAAKH+I++DIEV+P DYVNTAMERL K DVRYRFVIDVANT+K+
Sbjct:  261 PLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.423e-40
Identity = 80/99 (80.81%), Postives = 89/99 (89.90%), Query Frame = -2
Query:  257 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMK 553
            PL+PLIGLL S GKLV++GAPEKPLELP FPLL GRK+V GS IGG+KETQEMIDFAA+HNI ADIEVIP DY+NTAMERL KADVRYRFVID+ NT+K
Sbjct:  258 PLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 1.858e-40
Identity = 78/102 (76.47%), Postives = 93/102 (91.18%), Query Frame = -2
Query:  248 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKSTP 553
            PL+PL+GLLK++GKLV++GAP +PLELP FPL+ GRK+V GS++GG+KETQEM+D A KHNI ADIE+I ADYVNTAMERLAKADV+YRFVIDVANTMK TP
Sbjct:  256 PLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.170e-40
Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = -2
Query:  254 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 553
            P++PL+GLLK  GKLV++GAPEKPLELP FPLL GRK++ GS IGGLKETQEM+DFAA+HNI AD+EVIP DYVNTAMERL K+DVRYRFVIDVANT+K+
Sbjct:  237 PVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.684e-39
Identity = 76/100 (76.00%), Postives = 91/100 (91.00%), Query Frame = -2
Query:  251 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKST 550
            ++PLIGLLKS GKLVL+GA EKPLELP FPL+ GRK+VGG+L+GGLKETQEMIDF+ KHN++ +IEV+P DYVN AM+RLAKADV+YRFVIDVANT+K T
Sbjct:  263 IVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.875e-38
Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = -2
Query:  254 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKS 553
            PL PL  LLK  GKLV++GAPEKP ELP F LL GRK++GG++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTAMERL K+DVRYRFVID+ANTM++
Sbjct:  260 PLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.061e-38
Identity = 77/101 (76.24%), Postives = 88/101 (87.13%), Query Frame = -2
Query:  248 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKSTP 550
            L+PL+GLLK +GKLV++GAPEKPLELP  PL+  RK+V GS+IGG+KETQEMID A KHNI ADIE+I ADYVNTAMERL KADVRYRFVIDVANT+K  P
Sbjct:  257 LLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.055e-35
Identity = 72/97 (74.23%), Postives = 84/97 (86.60%), Query Frame = -2
Query:  260 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTM 550
            L PL+GLLK  GKL+ LG PEKPLELP FPL+ GRK+VGGS +GG+KETQEM+DF AKHNI ADIE+I  D +NTAMERLAK+DVRYRFVIDVAN++
Sbjct:  261 LYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.395e-34
Identity = 66/99 (66.67%), Postives = 85/99 (85.86%), Query Frame = -2
Query:  257 PLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMK 553
            P++PL+ LLK  GKL+++G P+KPL+LP FPL+ GR+ + GS IGGLKETQEMIDFAAK+NI AD+EVIP DY+NTAM+RL K+DV+YRFVIDV  ++K
Sbjct:  260 PIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
BLAST of DN617622 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.791e-34
Identity = 69/100 (69.00%), Postives = 85/100 (85.00%), Query Frame = -2
Query:  251 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDVANTMKST 550
            + PLIGLLKS GKLVLLGA EKP ++ AF L+ GRK + GS IGG++ETQEMIDFAA+H I+A+IE+I  DYVNTAM+RLAK DVRYRFVID++NT+ +T
Sbjct:  262 ISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361          
The following BLAST results are available for this feature:
BLAST of DN617622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_MESCR8.342e-4177.00Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_FRAAN1.423e-4080.81Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH7_ARATH1.858e-4076.47Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR3.170e-4078.00Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH3_STYHU2.684e-3976.00Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
MTDH_APIGR3.875e-3874.00Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH8_ARATH5.061e-3876.24Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH9_ARATH1.055e-3574.23Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
GEDH1_OCIBA3.395e-3466.67Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH6_ARATH5.791e-3469.00Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617622 ID=DN617622; Name=DN617622; organism=Citrus sinensis; type=EST; length=554bp
TTTTTTTTTTTTTTTTTAAATCAAAACCTGAATAATTAATTTCAGTAAAA
ACTAACATATAGCTCGCTATTACATAAATTTGTCACACAGATGGAATATA
TGTCACGAAATTATTATTCTTAAAAAGTAAAAACAGTTTTGAAATCACAA
CAAAAGACTAACATAATCTAAAACTTAGACGATGTTGTGACTCAACAATA
AACGCACATTCCTCGTTTTAAGCGCAACTCAAAAGGGAGAAAATTTAAGG
AGTGGACTTCATTGTGTTTGCAACGTCGATGACAAAGCGATATCTAACAT
CGGCTTTAGCAAGGCGCTCCATGGCTGTGTTCACATAGTCGGCCGGTATG
ACCTCAATATCAGCTCTGATGTTGTGTTTTGCTGCAAAATCAATCATCTC
TTGAGTCTCCTTCAACCCCCCAATGAGACTGCCACCAACTATCTTCCTCC
CCGTGAGCAGGGGGAAAGCTGGTAGCTCTAGTGGCTTCTCGGGTGCACCA
AGAAGTACAAGCTTTCCTTGAGATTTCAACAGTCCAATCAACGGCATTAG
CGGG
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