DN617609

Overview
NameDN617609
Unique NameDN617609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.166e-53
Identity = 107/165 (64.85%), Postives = 132/165 (80.00%), Query Frame = -3
Query:   58 SGESELLRHR--VISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 546
            SGES++  HR  V++ VLE+GI+VHSV+IGISLGAS+SP T K L AAL FHQ FEG+GLGGCI Q  F    + I+++FFS+TTPV       ISS YD++SPTALIV+G+ NAA+AGILIYMSLVD LAADFM+PKMQ+N RLQ  A++SLL+GAG MSLLA+
Sbjct:  194 SGESQVQLHRTRVVAQVLEVGIIVHSVVIGISLGASQSPDTAKALFAALMFHQCFEGLGLGGCIAQGNFNCMSITIMSIFFSVTTPVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIYMSLVDFLAADFMHPKMQSNTRLQIMAHISLLVGAGVMSLLAK 358          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.932e-51
Identity = 104/163 (63.80%), Postives = 129/163 (79.14%), Query Frame = -3
Query:   58 SGESELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 546
            S + ++LR RVI+ VLELGI+VHSV+IGISLGAS+SP   K L  AL FHQ FEG+GLGGCI Q KFK   V I++ FF++TTP+       I++ YDE+SPTALIV+G+ NAA+AGILIYMSLVDLLAADF +PKMQ+N  LQ  A+++LLLGAG MSLLA+
Sbjct:  175 SEKVQILRTRVIAQVLELGIIVHSVVIGISLGASQSPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVLNAASAGILIYMSLVDLLAADFTHPKMQSNTGLQIMAHIALLLGAGLMSLLAK 337          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.314e-48
Identity = 100/163 (61.35%), Postives = 127/163 (77.91%), Query Frame = -3
Query:   61 GESELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISS--VYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 543
            G +EL+R R++S VLE+GI+VHSVIIGISLGAS+S  TIKPL+AAL+FHQFFEG+GLGGCI+ A  KS+   ++A FFS+T P+       +SS   Y + S  A++VEG+ NAA+AGILIYMSLVDLLA DFMNP++Q+N  L   A +SL+LGAG MSLLA
Sbjct:  190 GSTELIRRRIVSQVLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLA 352          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.447e-45
Identity = 90/163 (55.21%), Postives = 124/163 (76.07%), Query Frame = -3
Query:   58 SGESELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 546
            S  ++LLR+RVI++VLELGI+VHSV+IG+SLGA+    TIK L+AAL FHQ FEGMGLGGCI QA++ +    ++A FF++TTP        +S+VY +NSP ALI  G+ NA +AG+LIYM+LVDLLAA+FM PK+Q + ++QF   ++ LLG G MS++A+
Sbjct:  175 SSNAQLLRYRVIAMVLELGIIVHSVVIGLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAK 337          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.469e-45
Identity = 88/156 (56.41%), Postives = 121/156 (77.56%), Query Frame = -3
Query:   61 LRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 528
            +R ++++ +LELGI+VHSVIIGISLGAS S  TIKPL+AA+TFHQ FEG GLGGCI++AKF+ + + ++ +FF+LT P+       ++ +Y+ENSP AL V G  NA A+GILIYM+LVDL+A  FMN K Q++ ++Q   +VSL++GAG MSLLA
Sbjct:  197 MRKKIVTQILELGIVVHSVIIGISLGASPSVSTIKPLIAAITFHQLFEGFGLGGCISEAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMALVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLA 352          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.090e-44
Identity = 87/155 (56.13%), Postives = 120/155 (77.42%), Query Frame = -3
Query:   61 RHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 525
            RH V+S +LELGI+ HS+IIG+SLG S+SP TI+PL+AAL+FHQFFEG  LGGCI+QA+F+++   I+A FF+LTTP+       ++S ++ +SP AL+ EGI ++ +AGIL+YM+LVDL+AADF++ +M  N RLQ  + V L LGAG MS LA
Sbjct:  217 RHVVVSQILELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALA 371          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.656e-44
Identity = 88/155 (56.77%), Postives = 120/155 (77.42%), Query Frame = -3
Query:   61 RHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLA 525
            RH V+S VLELGI+ HS+IIG+SLG S+SP TI+PL+AAL+FHQFFEG  LGGCI+QA+F+++   I+A FF+LTTP+       ++S ++ +S  AL+ EGI ++ +AGIL+YM+LVDL+AADF++ KM+ N RLQ  + V L LGAG MS LA
Sbjct:  232 RHIVVSQVLELGIVSHSIIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVYMALVDLIAADFLSTKMRCNFRLQIVSYVMLFLGAGLMSSLA 386          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 90/159 (56.60%), Postives = 118/159 (74.21%), Query Frame = -3
Query:   58 ELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 534
            +LLR+RVI+ VLELGI+VHSV+IG+SLGA+    TIK L+AAL FHQ FEGMGLGGCI QA++ +    ++A FF++TTP        +SSVY +NSPTALI  G+ NA +AG+LIYM+LVDLLAA+FM   +Q + +LQ     + LLG G MS+LA+
Sbjct:  187 QLLRYRVIATVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFVMAFFFAVTTPSGIALGIALSSVYKDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGSMLQRSVKLQLNCFGAALLGCGGMSVLAK 345          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 5.691e-42
Identity = 86/159 (54.09%), Postives = 120/159 (75.47%), Query Frame = -3
Query:   58 ELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 534
            +LLR+R++++VLELGI+V S++IG+S+G + +  TIK LVAAL FHQ FEGMGLGGCI QA++     A++A FF++TTP        +S  Y ENSP +LI  G+ NA++AG+LIYM+LVDLLAADFM  KMQ + +LQ  +  ++LLGAG MS++A+
Sbjct:  204 QLLRYRILAIVLELGIVVQSIVIGLSVGDTNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYGWVKKAVMAFFFAVTTPFGVVLGMALSKTYKENSPESLITVGLLNASSAGLLIYMALVDLLAADFMGQKMQRSIKLQLKSYAAVLLGAGGMSVMAK 362          
BLAST of DN617609 vs. ExPASy Swiss-Prot
Match: ZIP7_ARATH (Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.163e-41
Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = -3
Query:   58 SELLRHRVISLVLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAR 537
            SELLR++VI+ +LELGI+VHSV+IG+++GAS++  T++ L+AAL FHQ FEGMGLGG I QA+FKS+    +  FFS+TTP        I  +YDE SPTALIV G+ NA +AG+LIYM+LV+LLA +F  PK+Q N +L     V+   GA  MSL+A+
Sbjct:  204 SELLRNKVIAQILELGIVVHSVVIGLAMGASDNKCTVQSLIAALCFHQLFEGMGLGGSILQAQFKSKTNWTMVFFFSVTTPFGIVLGMAIQKIYDETSPTALIVVGVLNACSAGLLIYMALVNLLAHEFFGPKIQGNIKLHVLGYVATFTGAAGMSLMAK 363          
The following BLAST results are available for this feature:
BLAST of DN617609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ZIP5_ARATH7.166e-5364.85Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5... [more]
ZIP3_ARATH3.932e-5163.80Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3... [more]
ZIP1_ARATH5.314e-4861.35Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1... [more]
IRT1_ARATH1.447e-4555.21Fe(2+) transport protein 1 OS=Arabidopsis thaliana... [more]
ZIP12_ARATH2.469e-4556.41Probable zinc transporter 12 OS=Arabidopsis thalia... [more]
ZIP4_ARATH2.090e-4456.13Zinc transporter 4, chloroplastic OS=Arabidopsis t... [more]
IRT3_ARATH4.656e-4456.77Fe(2+) transport protein 3, chloroplastic OS=Arabi... [more]
ZIP8_ARATH5.147e-4356.60Probable zinc transporter 8 OS=Arabidopsis thalian... [more]
ZIP10_ARATH5.691e-4254.09Probable zinc transporter 10 OS=Arabidopsis thalia... [more]
ZIP7_ARATH2.163e-4154.38Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01H03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617609 ID=DN617609; Name=DN617609; organism=Citrus sinensis; type=EST; length=626bp
AAACTATTTGGATGAATAAAAATTGTAGACAAAATCTCGAATGAATTTTA
AGCCCATTCTGGCTAACAAAGACATGCAACCAGCGCCTAAAAGAAGAGAA
ACATTTGCTCCAAACTGAAGCCTTTTATTGGTTTGCATCTTTGGATTCAT
AAAATCTGCAGCAAGAAGATCCACCAAGGACATGTATATTAGGATTCCGG
CTGCTGCTGCATTGAATATTCCTTCAACAATAAGAGCGGTGGGGCTATTT
TCGTCATAAACACTTGATATTCCAATGCCTATTGCTATCCCAACTGGGGT
CGTCAAAGAGAAGAACAAGGCCAATATTGCAACTCCTCGAGACTTGAATT
TTGCCTGCGTAATGCAACCACCAAGACCCATTCCTTCAAAGAATTGATGA
AAAGTCAACGCTGCAACCAAAGGCTTAATGGTTTTTGGACTCTCAGAAGC
TCCCAAGGAAATTCCAATTATTACCGAGTGCACAAGAATTCCCAACTCCA
AAACCAGAGATATGACACGGTGTCGTAGAAGCTCCGATTCACCGGAATAT
TCAAGAAATCCATGAGCATGCCCATCAGTTGCATGGGTATGAACATGCAC
GTGACCTGCATGCTCCCCAACTTTCT
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