DN617604

Overview
NameDN617604
Unique NameDN617604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9384 contig Csv1_Contig9384:32..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL1_ARATH (Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.116e-48
Identity = 94/121 (77.69%), Postives = 107/121 (88.43%), Query Frame = 1
Query:  196 MEVELPRLGNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            ME E+  + N AMT DEVSMER+KSFVKALQELKNLRPQLYSAA+YCEKSYLHSEQKQMVLDNLKDY V+ALVNAVDHLGTVA KLTDL + Q SD+STME+R SC++Q+LLTC+ Y +KE
Sbjct:    1 METEISGMDNPAMTLDEVSMERNKSFVKALQELKNLRPQLYSAADYCEKSYLHSEQKQMVLDNLKDYTVKALVNAVDHLGTVASKLTDLFDHQNSDISTMEMRASCVSQQLLTCRTYIDKE 121          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL1_ORYSJ (Probable protein ABIL1 OS=Oryza sativa subsp. japonica GN=Os01g0622700 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.904e-48
Identity = 94/113 (83.19%), Postives = 104/113 (92.04%), Query Frame = 1
Query:  220 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            G    T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+C+NQ++LTCQ Y++KE
Sbjct:   27 GPAPTTVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLYEQQASEVSTLELKVACLNQQVLTCQTYTDKE 139          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL4_ORYSJ (Probable protein ABIL4 OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.668e-44
Identity = 87/107 (81.31%), Postives = 101/107 (94.39%), Query Frame = 1
Query:  235 TFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNK 555
            T DE SMERSKSFVKALQELKNLRPQLYSA+EYCEKSYLHSEQKQMVL+NLKDYAVRA+VNAVDHLGTVAYKLTDL EQQ S+VST+EL+V+ +NQ++LTCQ ++++
Sbjct:   23 TVDEASMERSKSFVKALQELKNLRPQLYSASEYCEKSYLHSEQKQMVLENLKDYAVRAVVNAVDHLGTVAYKLTDLFEQQASEVSTVELKVARLNQQILTCQIFTDR 129          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL2_ARATH (Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29
Identity = 62/112 (55.36%), Postives = 83/112 (74.11%), Query Frame = 1
Query:  223 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            + A  +DEVSM++S  F   LQ+LKNLR QLYSAAEY E SY   ++KQ+V++ LKDYAV+ALVN VDHLG+V YK+ D ++++  +VS  ELRVSC+ Q+L  CQ Y + E
Sbjct:    5 HEASNYDEVSMQQSMLFSDGLQDLKNLRAQLYSAAEYFELSYTTDDKKQIVVETLKDYAVKALVNTVDHLGSVTYKVNDFIDEKVDEVSETELRVSCIEQRLRMCQEYMDHE 116          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL3_ARATH (Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 60/110 (54.55%), Postives = 84/110 (76.36%), Query Frame = 1
Query:  229 AMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            A  +DE+SM++S  F  +L++LKNLR QLYSAAEY E SY + EQKQ+V++ LKDYA++ALVN VDHLG+V YK+ D ++++  +V+  ELRVSC+ Q+L  CQ Y + E
Sbjct:   13 ASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETLKDYAIKALVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYMDHE 122          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL2_ORYSJ (Putative protein ABIL2 OS=Oryza sativa subsp. japonica GN=Os01g0551800 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 49/113 (43.36%), Postives = 78/113 (69.03%), Query Frame = 1
Query:  220 GNRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            G  + T +EV M+ +  F   +++LK L+ QLYSAAEY E +Y   + KQ V++NLK+Y+V+ALVN VDHLG++++K++ L++Q+  +V    LRVSC++Q+    Q   +KE
Sbjct:   17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYSVKALVNTVDHLGSISFKVSSLIDQRFDEVDDTNLRVSCIHQRAQVSQACMDKE 129          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL4_ARATH (Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.421e-21
Identity = 48/111 (43.24%), Postives = 75/111 (67.57%), Query Frame = 1
Query:  223 NRAMTFDEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNK 555
            +++   DE+ M+++  F + L++LKNLR QLYSAAEY E SY  +E K+ V++ LK+YA +A+VN VDHLG+V+ K    L   ++  ST  LR+S + Q++  C++Y  K
Sbjct:   12 HQSSNHDELFMKQTLQFSETLKDLKNLRKQLYSAAEYFETSYGKAEHKETVIETLKEYAAKAVVNTVDHLGSVSDKFNSFLSDNSTHFSTTHLRLSSLEQRMRLCRDYMGK 122          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL3_ORYSJ (Probable protein ABIL3 OS=Oryza sativa subsp. japonica GN=Os01g0236400 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19
Identity = 47/106 (44.34%), Postives = 73/106 (68.87%), Query Frame = 1
Query:  241 DEVSMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYSNKE 558
            D  S++    F  +L++L+NLR QLYSAAEY E  Y ++ QK  V+ +LKDY V ALV+ VDHLG V+YK+ +L+++++ +V+  E RVS + Q++  CQ   ++E
Sbjct:   26 DMSSLQEGLLFSDSLKDLRNLRSQLYSAAEYFEVFYRNNSQKSTVMTSLKDYTVEALVSTVDHLGFVSYKVDNLVKERSDEVNETEFRVSSVEQRVRICQQTIDQE 131          
BLAST of DN617604 vs. ExPASy Swiss-Prot
Match: ABIL5_ORYSJ (Probable protein ABIL5 OS=Oryza sativa subsp. japonica GN=Os01g0760900 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.125e-15
Identity = 40/100 (40.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  250 SMERSKSFVKALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTSDVSTMELRVSCMNQKLLTCQNYS 549
            S+  +  F  AL+ELK+LR QL+  A+ CEK++L +E+K+++L++ K Y   A+V  +DHLGTV+ KL   L Q+  +++  E +++ + Q+LLTC+ Y+
Sbjct:   31 SLIGAAGFDGALRELKDLRSQLHQTADCCEKAFLDTEKKKLILESTKGYICDAIVAVIDHLGTVSSKLEQQL-QEKIEITQTEKKLNFLKQRLLTCEQYA 129          
The following BLAST results are available for this feature:
BLAST of DN617604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ABIL1_ARATH1.116e-4877.69Protein ABIL1 OS=Arabidopsis thaliana GN=ABIL1 PE=... [more]
ABIL1_ORYSJ1.904e-4883.19Probable protein ABIL1 OS=Oryza sativa subsp. japo... [more]
ABIL4_ORYSJ1.668e-4481.31Probable protein ABIL4 OS=Oryza sativa subsp. japo... [more]
ABIL2_ARATH1.161e-2955.36Protein ABIL2 OS=Arabidopsis thaliana GN=ABIL2 PE=... [more]
ABIL3_ARATH1.516e-2954.55Protein ABIL3 OS=Arabidopsis thaliana GN=ABIL3 PE=... [more]
ABIL2_ORYSJ5.222e-2243.36Putative protein ABIL2 OS=Oryza sativa subsp. japo... [more]
ABIL4_ARATH4.421e-2143.24Protein ABIL4 OS=Arabidopsis thaliana GN=ABIL4 PE=... [more]
ABIL3_ORYSJ1.857e-1944.34Probable protein ABIL3 OS=Oryza sativa subsp. japo... [more]
ABIL5_ORYSJ2.125e-1540.00Probable protein ABIL5 OS=Oryza sativa subsp. japo... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01G24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617604 ID=DN617604; Name=DN617604; organism=Citrus sinensis; type=EST; length=560bp
CCCACTTCTCGGAATCGCTTTCACTTCACTCATCATCCTTTCTTAGCCCT
CTTTTATTCCTTTCTCTATTATTAGATTAACTATCTCACCAAAACCCAAC
CTCAAATCTAAATTGTTAATGATAGTAATCTCGTTTGTGAATTATTTTAG
TTTTATGATTTGAAACTTTAGGGTTTTGTTTGATCGAGCTGAGAGATGGA
AGTGGAGCTACCGAGGCTGGGTAATCGTGCCATGACTTTCGATGAGGTCT
CCATGGAGCGTAGCAAAAGCTTCGTCAAAGCTTTGCAGGAGCTCAAGAAC
TTAAGACCTCAACTGTATTCAGCTGCAGAATATTGTGAAAAGTCTTATCT
TCACAGTGAGCAGAAACAAATGGTACTTGATAACCTAAAAGACTATGCTG
TAAGAGCGCTGGTCAATGCTGTTGATCACCTTGGCACTGTGGCTTACAAG
TTAACTGACCTTCTTGAGCAGCAAACATCTGATGTCTCAACCATGGAGCT
AAGGGTTTCTTGTATGAACCAGAAACTTCTTACATGCCAAAACTACTCAA
ATAAAGAAGG
back to top