DN617600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 8.898e-77 Identity = 136/161 (84.47%), Postives = 147/161 (91.30%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDM 484 ADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDKYEGGKIYG+PLGGT++EQPFAI YLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIARDGASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD+ Sbjct: 62 ADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDI 222
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 2.423e-74 Identity = 134/161 (83.23%), Postives = 145/161 (90.06%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDM 484 ADSQ VSDYVRYFLHQHTIQLGQPATVKVAANL RLLSYNNK+ LQTGMI+GGWDKYEGGKIYG+P GGT++EQPFAI YLYGFFDQAWKEGMT+EEAE+LVV AVSLAIARDGASGGVVRTVTIN +G +RKFY GD+L LWHEELEP NSLLD+ Sbjct: 63 ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDV 223
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_DICDI (Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 3.655e-38 Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHE 451 AD+Q +SDYVRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++GG +Y + LGG++++QPFAI Y+YG+ D +K MTK+E + V +++LA+ RDG+SGGV+R I+ GV RK PG+ LP + E Sbjct: 64 ADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVERKMIPGNNLPRFWE 213
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.540e-33 Identity = 66/146 (45.21%), Postives = 93/146 (63.70%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 439 AD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ QPFAI Y+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R I GV R+ GD +P Sbjct: 84 ADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAEPGVERQVLLGDQIP 229
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.623e-33 Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDT 433 AD+QTV+D ++Y+L + IQ G +V AA L + Y NKN L G+IV G+D+ GG +Y +PLGG++ +QP AI ++YGF D ++E MT+EEA + + AV+LA+ RDG+SGG +R V +N +G+ RKF+ DT Sbjct: 74 ADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMERKFFAIDT 217
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 137.887 bits (346), Expect = 2.295e-32 Identity = 65/146 (44.52%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 439 AD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R I GV R+ GD +P Sbjct: 84 ADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGDQIP 229
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 2.997e-32 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 439 AD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R I GV R+ GD +P Sbjct: 83 ADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIP 228
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB6_MOUSE (Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 2.997e-32 Identity = 64/146 (43.84%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLP 439 AD+Q V+D V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+GG ++ Q FAI Y+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R I GV R+ GD +P Sbjct: 83 ADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQVLLGDQIP 228
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 3.914e-32 Identity = 65/151 (43.05%), Postives = 98/151 (64.90%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 454 AD+Q ++D Y L H ++L +P V AAN+V+ +SY + L ++V GWD++EGG++YG +GG +I QPFAI Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI ++GV + GD LP +++E Sbjct: 70 ADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGT-MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADGVDHRVILGDELPKFYDE 219
BLAST of DN617600 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.139e-31 Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 2 Query: 2 ADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEE 454 AD+Q V+ ++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V LGG ++ QPF I Y+YG+ D +K M+KEE Q A++LA+ RD SGGV V I EGV PGD LP +H+E Sbjct: 67 ADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEGVEHVVIPGDKLPKFHDE 217 The following BLAST results are available for this feature:
BLAST of DN617600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617600 ID=DN617600; Name=DN617600; organism=Citrus sinensis; type=EST; length=486bpback to top |