DN617595

Overview
NameDN617595
Unique NameDN617595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2633 contig Csv1_Contig2633:27..607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.792e-44
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            SF  ALDTTKT+IWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLA+KMSHISTGGGASLELLEGK LPGVLALDDA
Sbjct:  307 SFGSALDTTKTVIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLAEKMSHISTGGGASLELLEGKPLPGVLALDDA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.836e-43
Identity = 85/95 (89.47%), Postives = 93/95 (97.89%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +F+EALDTTKT+IWNGPMGVFEF+KFAAGT+AIAK+LAEL+GKGVTTIIGGGDSVAAVEK GLADKMSHISTGGGASLELLEGK LPGVLALD+A
Sbjct:  307 TFAEALDTTKTVIWNGPMGVFEFEKFAAGTDAIAKQLAELTGKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.087e-41
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +F++ALDTTKT+IWNGPMGVFEFDKFA GTEAIAKKLA+LSGKGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  381 TFNDALDTTKTVIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKVLPGVIALDEA 475          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.051e-40
Identity = 82/94 (87.23%), Postives = 90/94 (95.74%), Query Frame = -1
Query:  300 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDD 581
            +F++ALDTT+TIIWNGPMGVFEFDKFA GTE+IAKKLAELS KGVTTIIGGGDSVAAVEKVG+AD MSHISTGGGASLELLEGK LPGV+ALD+
Sbjct:  378 TFNDALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLAELSKKGVTTIIGGGDSVAAVEKVGVADVMSHISTGGGASLELLEGKELPGVVALDE 471          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 5.967e-40
Identity = 81/95 (85.26%), Postives = 90/95 (94.74%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +FSEALDTT+T+IWNGPMGVFEF+KFAAGTEAIAKKL E+S KG TTIIGGGDSVAAVEKVG+A+ MSHISTGGGASLELLEGK LPGVLAL++A
Sbjct:  334 TFSEALDTTQTVIWNGPMGVFEFEKFAAGTEAIAKKLEEISKKGATTIIGGGDSVAAVEKVGVAEAMSHISTGGGASLELLEGKQLPGVLALNEA 428          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.329e-39
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +F+EALDTT+T+IWNGPMGVFE +KFAAGTEAIA KLAELS KGVTTIIGGGDSVAAVEKVG+A  MSHISTGGGASLELLEGK LPGV+ALD+A
Sbjct:  379 TFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVAAVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEA 473          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_NOSP7 (Phosphoglycerate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgk PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.274e-38
Identity = 79/94 (84.04%), Postives = 83/94 (88.30%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F EAL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALDDA
Sbjct:  307 FQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDDA 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 9.527e-38
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F EAL  TKT+IWNGPMGVFEFDKFAAGTEAIA  LAE+   G TTIIGGGDSVAAVEKVGLAD+MSHISTGGGASLELLEGK LPG+ ALD+A
Sbjct:  307 FQEALADTKTVIWNGPMGVFEFDKFAAGTEAIAHTLAEIGKTGTTTIIGGGDSVAAVEKVGLADQMSHISTGGGASLELLEGKVLPGIAALDEA 400          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_CYAP4 (Phosphoglycerate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.625e-37
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = -1
Query:  297 SFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 581
            +F EAL   KT+IWNGPMGVFEFDKFA GTEAIA  LA L+GKG +TIIGGGDSVAAVEKVG+A++MSHISTGGGASLELLEGK LPG++ALDDA
Sbjct:  312 TFQEALSDCKTVIWNGPMGVFEFDKFAVGTEAIAHSLAGLTGKGASTIIGGGDSVAAVEKVGVAEQMSHISTGGGASLELLEGKELPGIVALDDA 406          
BLAST of DN617595 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.122e-37
Identity = 79/94 (84.04%), Postives = 81/94 (86.17%), Query Frame = -1
Query:  297 FSEALDTTKTIIWNGPMGVFEFDKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA 578
            F  AL   KT+IWNGPMGVFEFDKFAAGT AIA  LAELSGKG  TIIGGGDSVAAVEK GLA+KMSHISTGGGASLELLEGK LPGV ALDDA
Sbjct:  308 FQAALADCKTVIWNGPMGVFEFDKFAAGTNAIATTLAELSGKGCCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKVLPGVAALDDA 401          
The following BLAST results are available for this feature:
BLAST of DN617595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC1.792e-4494.74Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKY_WHEAT9.836e-4389.47Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_TOBAC1.087e-4187.37Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKH_WHEAT2.051e-4087.23Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_SPIOL5.967e-4085.26Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_ARATH1.329e-3985.26Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGK_NOSP73.274e-3884.04Phosphoglycerate kinase OS=Nostoc punctiforme (str... [more]
PGK_ANAVT9.527e-3882.98Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGK_CYAP41.625e-3780.00Phosphoglycerate kinase OS=Cyanothece sp. (strain ... [more]
PGK_SYNS32.122e-3784.04Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617595 ID=DN617595; Name=DN617595; organism=Citrus sinensis; type=EST; length=581bp
GGATTCATGCATTATCTAACAATCATCAACGGCTCATTGTGATCAGAAAG
GAACAAGAACTTGACTTCAGGAAACTTATAGCCTTACCATCACAATGTTC
CAAAATGGGATCAAATCCAGAAAAATGCATCACCATTGATGCCTGTGAGA
AAGAATTTATTTTTACTCTTACAGCATCTACAAAACCAACTCTAATGATA
AAGTTTAACTTTTATCCACTCTGGGCTGACAACCAGCCACACATACAACT
CTGGAAATGGCACATTTAAAAAAGGAAAGTCCAGGAACTGGGTTTAAGCA
TCATCAAGAGCAAGCACACCAGGGAGTGTTTTGCCCTCAAGGAGCTCTAA
GCTGGCTCCACCTCCAGTGGAGATATGGCTCATCTTGTCAGCCAGACCAA
CCTTCTCTACGGCTGCAACTGAGTCACCTCCTCCAATGATTGTGGTCACT
CCCTTCCCGCTGAGCTCCGCAAGCTTCTTGGCAATTGCCTCAGTGCCAGC
AGCAAATTTATCAAATTCAAACACACCCATAGGTCCATTCCAGATGATGG
TTTTAGTAGTATCCAAAGCTTCACTGAATGA
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