DN617558

Overview
NameDN617558
Unique NameDN617558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:916..1525. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.092e-42
Identity = 75/90 (83.33%), Postives = 83/90 (92.22%), Query Frame = -3
Query:  348 NLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVD 608
            NL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVD
Sbjct:  268 NLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVD 357          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.622e-40
Identity = 70/87 (80.46%), Postives = 80/87 (91.95%), Query Frame = -3
Query:  348 NLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 608
            NLVK+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVD
Sbjct:  267 NLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVD 353          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.927e-39
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = -3
Query:  348 GPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 593
            GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYGS+G+APIR KEKPYW+IKNSWGENWGENGYYKIC GRN+CGVD
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVD 82          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.287e-39
Identity = 68/87 (78.16%), Postives = 79/87 (90.80%), Query Frame = -3
Query:  348 NLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 608
            NL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVD
Sbjct:  264 NLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVD 350          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.249e-38
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = -3
Query:  348 NLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 608
            NLVK+GPLAV INA WMQTY+ GVSCPY+C K  LDHGVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVD
Sbjct:  263 NLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVD 350          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.366e-21
Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = -3
Query:  351 LVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 605
            L+ +GP+++GINA  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV
Sbjct:  518 LLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV 604          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = -3
Query:  351 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 605
            +V  GPLA+  +AV  Q YIGGV         LDHG+LIVGY +     I  K  PYWI+KNSWG +WGE GY  +  G+N CGV
Sbjct:  252 IVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGV 334          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = -3
Query:  348 LVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 605
            L  +  ++VG+NA+ +Q Y  G+S P+   C KYL DH VL+VGYG S       K +P+WI+KNSWG  WGENGY+++  G   CG++
Sbjct:  228 LYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGIN 310          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = -3
Query:  357 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 605
            L K+GP+A+ ++A    +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY ++ MG N C
Sbjct:  255 LAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329          
BLAST of DN617558 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = -3
Query:  357 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 605
            L K+GP+A+ ++A    +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY ++ MG N C
Sbjct:  256 LAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 330          
The following BLAST results are available for this feature:
BLAST of DN617558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CYSP1_MAIZE1.092e-4283.33Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
RD19A_ARATH6.622e-4080.46Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
PAPA5_CARPA1.927e-3982.93Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
A494_ARATH3.287e-3978.16Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP_PEA1.249e-3878.41Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CPR1_DROME2.366e-2156.82Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CYSP1_DICDI1.755e-1650.59Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SCHMA2.292e-1646.07Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
LMCPB_LEIME8.709e-1648.19Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI8.709e-1648.19Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01G01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617558 ID=DN617558; Name=DN617558; organism=Citrus sinensis; type=EST; length=610bp
TCTACTANTTTTGAGTTACATAAAAAGAAAATATAACATTATAATATTTC
TACAAGCCTGCCCAATATAAAAAGAAAATATTAATACCATCTTCAATAAC
AATTCTGTAGCATGGTTAACTATAAAATGGATAAATATTACATTCTGACA
TGACATATGCTTAAATATTACAAGAGCATATAAAGTTCATGCCTCAGCCC
ACGCATGTAGGCATCCTTATAATTGCAGACGGCTATTTAAAAGGATATCC
TATAATATCTTCGTATATAAGCTCCACTTGCCTAGCACAACCTCCATAAT
GTCTAGCTTGAGGTTGTATGGACAGCAGCTACAGATGAGACCATGGAGTC
GACCCCACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCTC
CCCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTTG
AAACGGATCGGGGCGAAACCTGAAGATCCATAGCCCACGATAAGCACTCC
ATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATAT
ATGTTTGCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTTC
ACCAAATTTG
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