DN617527

Overview
NameDN617527
Unique NameDN617527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.708e-46
Identity = 94/116 (81.03%), Postives = 101/116 (87.07%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD          LTSGFSL++PNTFGNRIHRMLKLGLSI+E++GDADADMP LED   DAEGSKMEEVD
Sbjct:  584 IMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.856e-43
Identity = 94/117 (80.34%), Postives = 102/117 (87.18%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD          LTSGFSLD+PNTFG+RIHRMLKLGLSI ++DA +ADA+MPPLED A DAEGSKMEEVD
Sbjct:  584 IMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLEDDA-DAEGSKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 8.311e-43
Identity = 93/117 (79.49%), Postives = 100/117 (85.47%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD          LTSGFSLD+PNTFG+RIHRMLKLGLSI ++D  +ADADMPPLED A DAEGSKMEEVD
Sbjct:  584 IMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDVVEADADMPPLEDDA-DAEGSKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 4.125e-42
Identity = 93/117 (79.49%), Postives = 97/117 (82.91%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD          LTSGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  586 IMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.125e-42
Identity = 93/117 (79.49%), Postives = 97/117 (82.91%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD          LTSGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  586 IMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 9.189e-42
Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD          LTSGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  586 IMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.189e-42
Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD          LTSGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  586 IMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.509e-39
Identity = 86/116 (74.14%), Postives = 93/116 (80.17%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD          LTSGFSLDDPNTFG RIHRMLKLGLSI+E+    DADMP LE+ A   E SKMEEVD
Sbjct:  590 IMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEEEAGDDADMPALEEEA--GEESKMEEVD 703          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.613e-38
Identity = 86/117 (73.50%), Postives = 95/117 (81.20%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+AD+NDKSVKD          LTSGFSLDDPNTF  RIHRMLKLGL+I+ED A D DADMP L++ A  AE SKMEEVD
Sbjct:  601 IMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNIDEDAAADEDADMPALDEGA--AEESKMEEVD 715          
BLAST of DN617527 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 6.163e-38
Identity = 86/117 (73.50%), Postives = 94/117 (80.34%), Query Frame = -3
Query:  170 IMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPPLEDAADDAEGSKMEEVD 517
            IMKAQALRD+SM+GYMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD          LTSGFSLD+PNTF  RIHRMLKLGLSI+ED   + D DMP LE+  D AE SKMEEVD
Sbjct:  586 IMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGLSIDEDENVEEDGDMPELEE--DAAEESKMEEVD 700          
The following BLAST results are available for this feature:
BLAST of DN617527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
HSP80_SOLLC4.708e-4681.03Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_ARATH2.856e-4380.34Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH8.311e-4379.49Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP81_ORYSJ4.125e-4279.49Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI4.125e-4279.49Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ9.189e-4278.63Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ9.189e-4278.63Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_IPONI9.509e-3974.14Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE3.613e-3873.50Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP81_ARATH6.163e-3873.50Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01F08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617527 ID=DN617527; Name=DN617527; organism=Citrus sinensis; type=EST; length=540bp
AAGCATTTGCAAAACAATAAAACAAAACCTCCACCAAAGAGGGAAAATAA
AAATATAAAAGCACTAATCCCACAGTACTACCACCACAGAACGCATAACA
AAAAGAAACTACCTAGTTAAAAGAGTTTCATGAAAAAAGACTAGTATATC
AGACTATTATAGCTTCTTAATCAACTTCCTCCATCTTGCTGCCCTCAGCA
TCGTCAGCAGCATCCTCCAATGGTGGCATGTCAGCATCAGCATCACCAGC
ATCCTCCTCGATGCTCAGCCCGAGTTTCAACATCCTGTGGATTCTGTTGC
CGAAAGTGTTAGGGTCATCAAGGCTGAAACCAGAAGTGAGGAGAGCAGTC
TCAAAGAGCAGAAGGACAAGGTCCTTCACAGACTTGTCATTCTTGTCCGC
ATCAGCCCTCTTCCTGAGCTCCTCCATGATGGGGTTCTCCGGATTGATCT
CCATGGTCTTCTTGCTGGACATGTAACCAGCCATGCTGTTGTCTCTCAAG
GCCTGAGCCTTCATGATCCCTCTCCATGTTGGCTGTCCAT
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