DN617516

Overview
NameDN617516
Unique NameDN617516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.844e-43
Identity = 80/93 (86.02%), Postives = 86/93 (92.47%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGRLFV+ LEGKIYSCKHC THLAL E++VSKSFHC+HGKAYLFSKVVNV+ GE E R+MMTGMHTVADIFCV CGSIVGWKYETAHEKSQKY
Sbjct:    1 MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQKY 93          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.157e-39
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGRLF+VNLEGK YSCKHC+T+LALC+DVVSKSF  RHGKAYLFSKVVNV  G+KE+R+MMTGMHTV DI+CV CGS VGWKYE A EK+QKY
Sbjct:    1 MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKY 93          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.280e-38
Identity = 67/93 (72.04%), Postives = 83/93 (89.25%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGRLFV++LEG +YSCK+C+TH A+  D++SKSFHC+HG+AYLF  VVNV+VGEKE R+M+TG HTVADIFCV CGS+VGWKYE A++KSQKY
Sbjct:    1 MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKY 93          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL4_ARATH (Protein yippee-like At3g55890 OS=Arabidopsis thaliana GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.668e-36
Identity = 66/93 (70.97%), Postives = 82/93 (88.17%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F+V+LEG IY CK C+THL+  +D++SKSF C++G+AYLF+ VVNVSVGEKE+R+M+TG+H V DIFCVGCGS VGWKYE AHEKSQKY
Sbjct:    1 MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKY 93          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.259e-35
Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 2
Query:  164 MGRLFVVNLEGKIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            MGR+F V LEG+ Y C+ CRTHLAL +D+VS+SFHCR GKAYLF++ VN+S+G  EERLM++GMHTVADIFC  CG  VGWKYE+AHEK+QKY
Sbjct:    1 MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKY 93          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL4_RAT (Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKY
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKY 108          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL4_MOUSE (Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKY
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKY 108          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL4_HUMAN (Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKY
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKY 108          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL4_CERAE (Protein yippee-like 4 OS=Cercopithecus aethiops GN=YPEL4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.343e-24
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 2
Query:  197 KIYSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            + YSC HCR HLA  ++++SKSF   HG+AYLF+ VVNV  G  E+RL++TG+H+VADIFC  C + +GWKYE A E SQKY
Sbjct:   27 RTYSCVHCRAHLAKHDELISKSFQGSHGRAYLFNSVVNVGCGPAEQRLLLTGLHSVADIFCESCKTTLGWKYEQAFETSQKY 108          
BLAST of DN617516 vs. ExPASy Swiss-Prot
Match: YPEL3_ORYLA (Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.983e-23
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 2
Query:  203 YSCKHCRTHLALCEDVVSKSFHCRHGKAYLFSKVVNVSVGEKEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKSQKY 442
            YSC HCR HLA  +D++SKSF    G+AYLF+ VVNV  G  EERL++TG+H VADI+C  C + +GWKYE A E SQKY
Sbjct:   21 YSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIYCENCHTTLGWKYEQAFELSQKY 100          
The following BLAST results are available for this feature:
BLAST of DN617516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
YIPL_SOLTU3.844e-4386.02Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YIPL3_ARATH1.157e-3979.57Protein yippee-like At3g11230 OS=Arabidopsis thali... [more]
YIPL1_ARATH1.280e-3872.04Protein yippee-like At3g08990 OS=Arabidopsis thali... [more]
YIPL4_ARATH2.668e-3670.97Protein yippee-like At3g55890 OS=Arabidopsis thali... [more]
YIPL7_ARATH2.259e-3569.89Protein yippee-like At5g53940 OS=Arabidopsis thali... [more]
YPEL4_RAT2.343e-2458.54Protein yippee-like 4 OS=Rattus norvegicus GN=Ypel... [more]
YPEL4_MOUSE2.343e-2458.54Protein yippee-like 4 OS=Mus musculus GN=Ypel4 PE=... [more]
YPEL4_HUMAN2.343e-2458.54Protein yippee-like 4 OS=Homo sapiens GN=YPEL4 PE=... [more]
YPEL4_CERAE2.343e-2458.54Protein yippee-like 4 OS=Cercopithecus aethiops GN... [more]
YPEL3_ORYLA1.983e-2360.00Protein yippee-like 3 OS=Oryzias latipes GN=ypel3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01E24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617516 ID=DN617516; Name=DN617516; organism=Citrus sinensis; type=EST; length=444bp
CTTTCTCAAGCATCTCCCTTTTATTAAATTTTCTTTATTTTCAAGTAATT
TTCTTTTTGTTTGTTTTCAATGATTCATTCAACCACCACCGTCTTGTTTG
ATTTTTGATTTTGTGTGTATTTTTTTCCTGCAAAGATCTGTTGGTAGAGT
AGTGTGAAGAATTATGGGGAGGCTATTTGTGGTGAATCTTGAAGGGAAGA
TCTATAGCTGCAAGCACTGCAGGACCCATCTTGCTTTATGTGAAGACGTC
GTCTCTAAGTCTTTCCATTGCAGGCATGGGAAAGCTTATCTCTTCAGTAA
GGTTGTGAATGTTTCTGTTGGAGAGAAAGAGGAGAGATTGATGATGACTG
GGATGCATACAGTGGCTGACATTTTCTGTGTTGGGTGTGGATCAATTGTC
GGTTGGAAATACGAGACTGCCCATGAAAAGAGCCAAAAGTACAA
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