DN617491

Overview
NameDN617491
Unique NameDN617491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2408 contig Csv1_Contig2408:46..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.878e-39
Identity = 89/215 (41.40%), Postives = 129/215 (60.00%), Query Frame = 1
Query:  148 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKF------TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + L  +   + A+V   +   D E+ +  PKL IV++++VG D +D+ +  ++G+ VTNTPDVLTD  ADLA  L+LA  R + + DR+VRSG+WKK       K+       GKT+GIIGLGRIG A+AKRA+ F+  I YYSRT K  ++ +    +  + +L      +V+A PLT ET H+IN E +  +    +LINI RG  VD   L+
Sbjct:   37 EILLKKVKEVDALVTMLSERIDKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALV 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.128e-38
Identity = 87/215 (40.47%), Postives = 132/215 (61.40%), Query Frame = 1
Query:  148 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYK------LTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + L  +  ++ A+V   +   DAE+ DA P+L+IV++++VG D +D+ +  + GV +TNTPDVLT+  AD+A  L+LA  RRL E+D++VRSG+WKK          L     G+T+GI+G GRIG A+A+RA+ F   I Y SRT KP ++ +    +  + EL      +V+  PLT+ET H+IN E +  + P  +L+NI RG  VD   L+
Sbjct:   37 EVLLEKVRDVDALVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALV 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.925e-38
Identity = 87/215 (40.47%), Postives = 131/215 (60.93%), Query Frame = 1
Query:  148 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGD------YKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + L  +  ++ A+V   +   D+E+ DA P+L IV++++VG D +DV +   +G+ VTNTPDVLTD  AD A  L+LA  RRL E+D + RSG+WK+        + L     GKT+GI+G GRIG AVA+RA  F   I YYSR+ KP  + +    + S+ +L      +V+A PLT+ET+++IN E +  +    +L+NI RG  VD + L+
Sbjct:   37 EVLLKKVRDVDALVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALM 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.283e-38
Identity = 86/206 (41.75%), Postives = 122/206 (59.22%), Query Frame = 1
Query:  175 IRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYK------LTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + A+V   T   D EL++  PKL+I++ ++VG D +D+ +  ++G+ VTNTP VLTD  ADLA  L+LAV RR+ E+D +VRSG+WKK +        L     GKT+GI+G GRIG A+AKRA+ F   I YYSRT KP  + +    Y     L      + +  PLT+ET H+I  + +  + P  +LIN  RG  VD   L+
Sbjct:   46 VDALVTLVTDKVDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALI 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.287e-38
Identity = 91/216 (42.13%), Postives = 127/216 (58.80%), Query Frame = 1
Query:  148 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYK------LTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKP----NLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + L  +  ++ A+V   +   D E+ D  P+L IV++++VG D VDV +   +G+ VTNTPDVLT+  AD A  L+LA  RRL E+D + RSG+WK+          L     GKT+GIIG GRIG AVA+RA+ F   I YYSRT KP     LK ++ P + EL      +V+A PLT+ET H+I    +  + P  +L+NI RG  VD   L+
Sbjct:   37 EVLLEKVRDVDALVTMLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKP-LEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALI 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38
Identity = 85/215 (39.53%), Postives = 127/215 (59.07%), Query Frame = 1
Query:  148 QFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDYKLTTKF------TGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            + L  +  ++ A+V   +   D E+ +  P+L IV++++VG D +DV +  ++G+ VTNTP VLTD  ADLA  L+LA  R L + D++ RSG+WKK       K+       GKT+GIIG GRIG A+AKRA  F   I YYSRT KP ++ +    +  + EL      +V+A PL +ET H+IN E +  +    +LIN+ RG  +D + L+
Sbjct:   38 EILLEKVKDVDALVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALI 252          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.801e-36
Identity = 80/207 (38.65%), Postives = 127/207 (61.35%), Query Frame = 1
Query:  172 NIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK------GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            ++ A+V   +   D E+ +  P+L IV++++VG D +DV +   +G+ VTNTPDVLT+  AD A  L+LA  R + + D++VRSG+WK+        + L  +  GKT+GI+G GRIG A+A+RA+ F+  I YYSRT K   + +    Y  + E+      +++A PLT+ET ++IN E +  + P  +L+NI RG  VD + L+
Sbjct:   45 DVDALVTMLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALI 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.845e-36
Identity = 81/195 (41.54%), Postives = 124/195 (63.59%), Query Frame = 1
Query:  211 DAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLT-TKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYS-------RTEKPNLKYKYYPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELL 765
            DAE++DA P L+++S++SVG D +D+ +  ++G+ VT+TP VLTD VA+  +GL+LAV RR+ E+D+ +R+G+W K    Y LT  +  GKT+G++GLGRIG+A AKR  +F   I YY         T  PN+++    +++E +    I+ +  PLT+ET H+IN E +  +     LIN  RGP VD   L+
Sbjct:   60 DAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNMEFTDLDTLLEKSD---IVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALV 251          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34
Identity = 80/200 (40.00%), Postives = 118/200 (59.00%), Query Frame = 1
Query:  181 AVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKKGDY---KLTTKFTGKTVGIIGLGRIGMAVAKRAEAFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDEREL 762
            A+V   T   DAE+ +A PKL IV+ ++VG D +DV +  ++G+ VTNTP VLT+  AD A  L++A  RR+ E+DRYVR GKWK   +    L     G+T+GI+G+GRIG AVA+RA+ F   I YY    + + + +    Y  + +L      + +  PLTEET H+I  E +  +    +L+N  RG  VD++ L
Sbjct:   48 ALVSLLTDPIDAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEYVPLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKAL 247          
BLAST of DN617491 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30
Identity = 84/238 (35.29%), Postives = 130/238 (54.62%), Query Frame = 1
Query:   79 TYLEQELERRF--NLFKFWTVSDKTQFLKAQQNNIRAVVGNATAGADAELIDALPKLEIVSSFSVGLDKVDVAKCKEKGVRVTNTPDVLTDDVADLAIGLMLAVLRRLCESDRYVRSGKWKK--GDYKLTTKFTGKTVGIIGLGRIGMAVAKRAE-AFSCPINYYSRTEKPNLKYKY---YPSVVELASNCHILVVACPLTEETRHIINREVIDALGPKGVLINIGRGPHVDERELLS 768
            T L Q L + F  N F   T  ++ + L A Q     ++G+     D + +   P L   S+ SVG D  DV    ++G+ + +TP VLT+ VAD  + LML+  RR+ E    V++G+W++  GD         KT+GI+G+GRIGMA+A+RA   FS P+ Y SR      + ++   + S+  L +    L +  P+TE+T H+I RE +  +    +LIN GRGP VDE+ L++
Sbjct:   13 TDLHQRLAQHFTVNSFDGLTPDNQPELLAALQQ-AEGLIGSG-GKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGREQLAKIKSSAILINAGRGPVVDEQALIA 248          
The following BLAST results are available for this feature:
BLAST of DN617491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
GYAR_PYRHO3.878e-3941.40Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEON1.128e-3840.47Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRKO1.925e-3840.47Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THELI3.283e-3841.75Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_THEGJ4.287e-3842.13Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRAB9.551e-3839.53Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRFU1.801e-3638.65Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THEPD6.845e-3641.54Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_KORCO1.686e-3440.00Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GHRB_YERPY1.929e-3035.29Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_01E11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617491 ID=DN617491; Name=DN617491; organism=Citrus sinensis; type=EST; length=768bp
GGAAAATCCAACGTGGGTTCATTTTGTGATTTCAGTTGAATGGAGTCAAT
CGGTGTCTTGATGGCCTGTCCCATGAACACGTACTTAGAGCAGGAACTCG
AGAGAAGATTCAATCTTTTCAAGTTCTGGACGGTTTCAGACAAAACCCAG
TTCCTAAAAGCACAACAAAACAACATACGTGCGGTTGTCGGGAACGCGAC
GGCCGGTGCTGACGCTGAACTGATTGATGCTTTACCTAAGCTTGAGATTG
TATCGAGTTTTAGTGTGGGATTGGACAAGGTTGACGTGGCCAAGTGCAAA
GAAAAGGGCGTTAGAGTTACTAACACCCCTGATGTGTTGACTGATGACGT
GGCCGATTTGGCCATTGGGTTGATGTTGGCTGTGTTGAGGAGGTTGTGTG
AGAGCGATAGGTATGTCAGAAGTGGGAAGTGGAAGAAGGGGGATTATAAG
CTGACCACTAAGTTCACTGGAAAAACAGTTGGCATTATTGGGCTAGGAAG
AATTGGCATGGCAGTTGCTAAGAGAGCTGAAGCATTTAGCTGCCCAATCA
ACTACTACTCTAGAACAGAGAAACCAAATTTGAAATACAAATACTACCCT
AGTGTAGTTGAGTTGGCCTCCAACTGTCACATTCTGGTCGTTGCATGCCC
ACTAACGGAAGAGACCCGCCATATCATTAATCGTGAAGTCATTGATGCTT
TGGGACCAAAAGGTGTTCTCATCAACATTGGGAGGGGTCCTCACGTGGAT
GAACGTGAACTGTTGTCT
back to top