DN617479

Overview
NameDN617479
Unique NameDN617479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10126 contig Csv1_Contig10126:357..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_MOUSE (Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 9.193e-59
Identity = 114/214 (53.27%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIA 717
            +H+AS NNFPT            CL ++LA++  +   +  LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q+  E HW  L I+I VVS+ +K+T ST GM+ SVETS LL+ RA+ VVP+R+ +M   IQ  DF  FAQLT  DSNQFHA CLDT PPI Y+NDTS RII  V R+N   G  +VAYTFDAGPNAV+      +A
Sbjct:  111 VHVASVNNFPTAAGLASSAAGYACLAYTLAQVYGV---EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDFQGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIFTLEDTVA 321          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_DANRE (Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.568e-58
Identity = 111/206 (53.88%), Postives = 148/206 (71.84%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            +HI S NNFPT            CLV++L++L N+   + +LS +ARQGSGSACRSL+GGFV+W +G++ +G DS+A Q+  E +W +L ++I VVS+ QK   ST+GM  SVETS LL++RA  VVP R+ +M  AI+  DF  F +LT  DSNQFHA+CLDT PPIFY+N+ SH+IIS V R+N+  G  +VAYTFDAGPNAV+
Sbjct:  109 VHICSVNNFPTAAGLASSAAGYACLVYTLSQLFNV---EGELSGVARQGSGSACRSLYGGFVQWKLGEQSDGKDSIAEQVASELYWPELRVLILVVSAEQKSVGSTSGMHTSVETSHLLKYRADAVVPGRMEEMIRAIRLRDFPKFGELTMKDSNQFHAICLDTYPPIFYLNNISHQIISLVHRYNQYYGETRVAYTFDAGPNAVI 311          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_RAT (Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.783e-58
Identity = 111/214 (51.87%), Postives = 145/214 (67.76%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIA 717
            +H+AS NNFPT            CL ++LA++  +   +  LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q+  E HW  L ++I VVS+ +K T ST GM+ SV TS LL+ RA+ +VP+R+ +M   IQ  DF +FAQLT  DSNQFHA CLDT PPI Y+NDTS RII  V R+N   G  +VAYTFDAGPNAV+      +A
Sbjct:  111 VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGV---EGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRVLILVVSAEKKPTGSTVGMQTSVATSTLLKFRAESIVPERMKEMTRCIQEQDFQAFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVIFTLEDTVA 321          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_HUMAN (Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.734e-57
Identity = 113/214 (52.80%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIA 717
            +H+AS NNFPT            CL ++LA++  +   +S LS +AR+GSGSACRSL+GGFV+W MG++ +G DS+A Q+  E HW +L ++I VVS+ +K T ST GMR SVETS LL+ RA+ VVP R+ +M   I+  DF SFAQLT  DSNQFHA CLDT PPI Y+N  S RII  V R+N   G  +VAYTFDAGPNAV+   +  +A
Sbjct:  110 VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIFTLDDTVA 320          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_DEBHA (Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii GN=ERG19 PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 7.284e-56
Identity = 110/206 (53.40%), Postives = 139/206 (67.48%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            +HI S NNFPT             LV S+AKL  L +N S++S IAR+GSGSACRSLFGG+V W MG+E NG DS AV++    HW ++   I VVS  +K+T ST+GM+ +V TS L Q R KEVVPKR   M+++I   DF++F  LT  DSN FHAVCLD++PPIFY+NDTS +II  +   N+  G    AYTFDAGPNAV+
Sbjct:  104 VHIVSENNFPTAAGLASSAAGFAALVVSIAKLYELPQNMSEISKIARKGSGSACRSLFGGYVAWEMGQETNGEDSKAVEVAPLSHWPNMKAAILVVSDDKKDTPSTSGMQTTVATSDLFQWRIKEVVPKRFDDMKDSILRKDFATFGDLTMKDSNSFHAVCLDSTPPIFYLNDTSKKIIKLIHELNKREGKIIAAYTFDAGPNAVI 309          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_BOVIN (Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 108/214 (50.47%), Postives = 144/214 (67.29%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIA 717
            +H+AS NNFPT            CL ++LA++  +    S LS +AR+GSGSACRSL+GGFV+W MG+  +G DS+A Q+  E HW +L ++I VVS+ +K   ST GM+ SVETS LL+ RA+ +VP R+ +M   I+  +F +F QLT  DSNQFHA CLDT PPI Y++DTS RII  V R+N   G  +VAYTFDAGPNAV+   +  +A
Sbjct:  110 VHVASENNFPTAAGLASSAAGYACLAYTLARVYGV---DSDLSEVARRGSGSACRSLYGGFVEWQMGERPDGKDSVACQVAPESHWPELRVLILVVSAERKPMGSTAGMQTSVETSALLKFRAEALVPPRMAEMTRCIRERNFQAFGQLTMKDSNQFHATCLDTFPPISYLSDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVVFTLDDTVA 320          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_ASHGO (Diphosphomevalonate decarboxylase OS=Ashbya gossypii GN=ERG19 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.722e-55
Identity = 110/206 (53.40%), Postives = 139/206 (67.48%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            LHI S NNFPT             LV ++AKL  L ++ S++S IAR+GSGSACRSL+GG+V W MG E +GSDS AVQ+ D EHW ++   I VVS+ +K+T ST+GM+++V TS L + R   VVP+R  +M  AI+  DF++FA+LT  DSN FHA CLD+ PPIFYMNDTS RI+      N       VAYTFDAGPNAVL
Sbjct:   79 LHIVSENNFPTAAGLASSAAGFAALVVAVAKLYGLPQDYSEISKIARKGSGSACRSLYGGYVAWEMGAEADGSDSRAVQIADVEHWPEMRAAILVVSADRKDTPSTSGMQQTVHTSDLFKERVATVVPRRYGEMAAAIRARDFATFARLTMQDSNSFHATCLDSFPPIFYMNDTSRRIVKLCHLINEFYNETIVAYTFDAGPNAVL 284          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_DICDI (Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum GN=mvd PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.794e-54
Identity = 103/206 (50.00%), Postives = 141/206 (68.45%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            +HIAS NNFPT            CLVF+LA++  +      +S IAR GSGSACRS++GGFVKW MG + +GSDS+AVQ+  E HW D+ II+ VV+ ++KETSST GM++S  TS++++ R    VP R+  +EEAI   DF +F  +T  DS+ FH VC  T+PPI+Y+NDTS  I++ + R+N+  GS + AYTFDAGPNA +
Sbjct:   96 VHIASINNFPTAAGLASSASGYCCLVFTLAQMYGV---DGDISGIARLGSGSACRSMYGGFVKWEMGTKDDGSDSIAVQVQPESHWPDMNIIVLVVNDKKKETSSTDGMQKSAATSVMMKERCAVTVPNRMRDIEEAINKKDFQTFGDITMKDSDDFHEVCATTTPPIYYLNDTSRYIMNLIHRYNKLSGSIKCAYTFDAGPNACI 298          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_SCHPO (Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe GN=erg19 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.060e-54
Identity = 106/208 (50.96%), Postives = 140/208 (67.31%), Query Frame = 1
Query:   70 LHLHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            L LH+ S NNFPT                ++A+L +L    +QLS IARQGSGSACRSLFGG+V W MG+  +G+DS+AVQ+   E+W ++ + + V S+ +K  SST GM+ +V +S L QHR + +VP+RI +M+ AI+  DF +FA+LT  DSNQFHA CLDT PPIFY+NDTS  +I  VE  N + G    AYTFDAGPNAV+
Sbjct:  105 LKLHVVSENNFPTAAGLASSAAGYAAFCEAIARLYDLPWTPTQLSRIARQGSGSACRSLFGGYVAWEMGELHSGADSVAVQVEPVENWPEIRVAVLVASAAKKGVSSTAGMQATVASSTLFQHRIQNIVPQRIQEMKTAIRERDFETFAKLTMTDSNQFHACCLDTFPPIFYLNDTSRAVIRVVENINATAGKTIAAYTFDAGPNAVI 312          
BLAST of DN617479 vs. ExPASy Swiss-Prot
Match: ERG19_YEAST (Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae GN=ERG19 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 8.905e-54
Identity = 110/206 (53.40%), Postives = 136/206 (66.02%), Query Frame = 1
Query:   76 LHIASFNNFPTXXXXXXXXXXXXCLVFSLAKLMNLKENQSQLSAIARQGSGSACRSLFGGFVKWIMGKEGNGSDSLAVQLVDEEHWNDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL 693
            LHI S NNFPT             LV ++AKL  L ++ S++S IAR+GSGSACRSLFGG+V W MGK  +G DS+AVQ+ D   W  +   + VVS  +K+ SST GM+ +V TS L + R + VVPKR   M +AI   DF++FA+ T  DSN FHA CLD+ PPIFYMNDTS RIIS+    N+  G   VAYTFDAGPNAVL
Sbjct:  104 LHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVL 309          
The following BLAST results are available for this feature:
BLAST of DN617479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ERG19_MOUSE9.193e-5953.27Diphosphomevalonate decarboxylase OS=Mus musculus ... [more]
ERG19_DANRE1.568e-5853.88Diphosphomevalonate decarboxylase OS=Danio rerio G... [more]
ERG19_RAT7.783e-5851.87Diphosphomevalonate decarboxylase OS=Rattus norveg... [more]
ERG19_HUMAN1.734e-5752.80Diphosphomevalonate decarboxylase OS=Homo sapiens ... [more]
ERG19_DEBHA7.284e-5653.40Diphosphomevalonate decarboxylase OS=Debaryomyces ... [more]
ERG19_BOVIN1.623e-5550.47Diphosphomevalonate decarboxylase OS=Bos taurus GN... [more]
ERG19_ASHGO4.722e-5553.40Diphosphomevalonate decarboxylase OS=Ashbya gossyp... [more]
ERG19_DICDI1.794e-5450.00Diphosphomevalonate decarboxylase OS=Dictyostelium... [more]
ERG19_SCHPO3.060e-5450.96Diphosphomevalonate decarboxylase OS=Schizosacchar... [more]
ERG19_YEAST8.905e-5453.40Diphosphomevalonate decarboxylase OS=Saccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01E05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617479 ID=DN617479; Name=DN617479; organism=Citrus sinensis; type=EST; length=743bp
CGGAGTCGTGCTTGTGATGTTGAGGACAAGGAGAAAGGGATCAAGATTGA
GAAGAAGGACTGGCAGAAATTGCATTTACACATTGCTTCGTTTAACAATT
TTCCGACGGCCGCTGGATTGGCTTCCTCTGCTGCTGGTTTTGCCTGCCTT
GTTTTTTCACTGGCTAAGCTGATGAATTTGAAAGAAAATCAGAGCCAGCT
TTCTGCTATAGCTAGGCAAGGTTCAGGCAGTGCTTGTCGTAGTCTGTTTG
GTGGATTTGTCAAGTGGATAATGGGAAAAGAAGGAAATGGAAGTGACAGC
CTTGCAGTTCAACTTGTTGATGAAGAGCACTGGAATGATCTTGTTATTAT
TATTGCTGTGGTGAGTTCACGGCAGAAGGAAACAAGTAGCACCACAGGAA
TGCGTGAGAGTGTTGAAACAAGTTTGCTTTTACAACATAGAGCAAAGGAA
GTTGTGCCAAAACGGATAGTACAAATGGAAGAAGCCATCCAAAATCATGA
TTTTTCGTCTTTTGCACAATTGACCTGTGCTGATAGTAATCAATTTCATG
CGGTTTGCTTGGATACATCTCCCCCAATATTTTACATGAATGATACATCC
CACAGAATTATCAGCTATGTTGAAAGATGGAATCGTTCCGTGGGATCACC
TCAGGTGGCATATACTTTTGATGCTGGGCCTAATGCTGTTCTGATCGCTC
GTAATAGAAAGATTGCTACCGAATTGCTTCAGAGGCTACTTTT
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