DN617458

Overview
NameDN617458
Unique NameDN617458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN617458_ssr287 microsatellite DN617458_ssr287:287..296. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5659 contig Csv1_Contig5659:491..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 69/91 (75.82%), Postives = 83/91 (91.21%), Query Frame = -3
Query:  388 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 660
            K   NEI++KIE AA+P+GFDVK NN+K+KL GEK+GRKG L+VATE+F+VAPSLYMVE+RKSGGDTLEFHKFYKNL+TGLKD+VWK+ DE
Sbjct:  367 KSSANEIVTKIEAAAAPMGFDVKTNNYKMKLTGEKSGRKGQLAVATEVFQVAPSLYMVEMRKSGGDTLEFHKFYKNLTTGLKDIVWKTIDE 457          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32
Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = -3
Query:  388 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWK------SGDE 654
            P NEI+SKIE AA P+GF+V+K N+KLKLQGE  GRKG L++ATE+FEV PSLYMVELRKS GDTLEFHKFY N+S GLKDV+WK      +GDE
Sbjct:  349 PANEILSKIEAAAGPMGFNVQKRNYKLKLQGENPGRKGQLAIATEVFEVTPSLYMVELRKSNGDTLEFHKFYHNISNGLKDVMWKPESSIIAGDE 443          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.474e-32
Identity = 62/88 (70.45%), Postives = 81/88 (92.05%), Query Frame = -3
Query:  397 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 660
            +R  +EI+SK+EE A PLGF+V+K+N+K+K++G+K+GRKG LSVATE+FEVAPSL++VELRK+GGDTLEFHKFYKN S+GLKDVVW +
Sbjct:  351 QRSASEIMSKMEETAKPLGFNVRKDNYKIKMKGDKSGRKGQLSVATEVFEVAPSLHVVELRKTGGDTLEFHKFYKNFSSGLKDVVWNT 438          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 63/83 (75.90%), Postives = 76/83 (91.57%), Query Frame = -3
Query:  397 EIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKS 645
            EI+SKIEEA  PLGF+V+K N+K+KL+G+KTGRKG+LSVATE+FEVAPSL+MVELRK+GGDTLEFH FY N S+ LKD+VWKS
Sbjct:  364 EIMSKIEEACGPLGFNVRKQNYKMKLKGDKTGRKGYLSVATEVFEVAPSLHMVELRKTGGDTLEFHNFYNNFSSELKDIVWKS 446          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.118e-30
Identity = 65/90 (72.22%), Postives = 76/90 (84.44%), Query Frame = -3
Query:  391 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 660
            K P  EI+ KIEEAA PLGFDV+K N+KL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  343 KCPPKEIVRKIEEAAKPLGFDVQKKNYKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 432          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.753e-29
Identity = 57/92 (61.96%), Postives = 76/92 (82.61%), Query Frame = -3
Query:  385 KRPVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDET 660
            K   N+++ KIEEA+ PLGFD++K N+K++L+    GRKG+L VATEIF+V+PSL+M+E+RK+ GDTLEFHKFYK LST L DVVWKSG+ +
Sbjct:  344 KGAANDLVQKIEEASKPLGFDIQKKNYKMRLENVTAGRKGNLRVATEIFQVSPSLHMIEVRKTKGDTLEFHKFYKKLSTSLNDVVWKSGESS 435          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 58/89 (65.17%), Postives = 75/89 (84.27%), Query Frame = -3
Query:  388 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGDE 654
            P  EII+KIEEAA PLGFD++K N+K++++  K GRKG+L+VATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVWK   E
Sbjct:  353 PPKEIITKIEEAAKPLGFDIQKKNYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRTLSTQLKDVVWKCDGE 441          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.780e-28
Identity = 66/106 (62.26%), Postives = 76/106 (71.70%), Query Frame = -3
Query:  391 KRPVNEIISKIEEAASPLGFDVKKNN----------------FKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 660
            K P  EI+ KIEEAA PLGFDV+K N                FKL+L+  K GRKG+L+VATEI +VAPSL+MVE+RK+ GDTLEFHKFYKNLS  LKDVVWKS D
Sbjct:  343 KCPPKEIVRKIEEAAKPLGFDVQKKNYKICSPCLTTICMNIPFKLRLEKVKAGRKGNLNVATEILQVAPSLHMVEVRKAKGDTLEFHKFYKNLSRTLKDVVWKSDD 448          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.780e-28
Identity = 58/86 (67.44%), Postives = 72/86 (83.72%), Query Frame = -3
Query:  391 NEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 648
            NEII KIEEAA PLGFDV+K N+K++L+  K GRKG+L+VATEIF+VAPSL+MV++ KS GDTLEFHKFYK LS  L+ VVW + +
Sbjct:  349 NEIIEKIEEAAKPLGFDVQKKNYKMRLENVKAGRKGNLNVATEIFQVAPSLHMVQVSKSKGDTLEFHKFYKKLSNSLEQVVWTNNE 434          
BLAST of DN617458 vs. ExPASy Swiss-Prot
Match: CIPK3_ORYSJ (CBL-interacting protein kinase 3 OS=Oryza sativa subsp. japonica GN=CIPK3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.859e-26
Identity = 53/88 (60.23%), Postives = 75/88 (85.23%), Query Frame = -3
Query:  391 PVNEIISKIEEAASPLGFDVKKNNFKLKLQGEKTGRKGHLSVATEIFEVAPSLYMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKSGD 654
            P  EII++IEEAA+ LGF+++K N++++++  K GRKGHL++ATE+F+VAPSL++VEL+K+ GDTLEF KFY+ LST LKDVVW+  D
Sbjct:  352 PPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELED 439          
The following BLAST results are available for this feature:
BLAST of DN617458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CIPKN_ARATH6.765e-3675.82CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKN_ORYSJ1.194e-3270.53CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPK9_ARATH3.474e-3270.45CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPK9_ORYSJ7.740e-3275.90CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPKW_ORYSJ1.118e-3072.22CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKQ_ARATH2.753e-2961.96CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKV_ORYSJ2.330e-2865.17CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPKX_ORYSJ6.780e-2862.26CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPK3_ARATH6.780e-2867.44CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPK3_ORYSJ4.859e-2660.23CBL-interacting protein kinase 3 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01D19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001D19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617458 ID=DN617458; Name=DN617458; organism=Citrus sinensis; type=EST; length=662bp
CCCTTTTTTTTTTTTACAATATATTTATTCTTTATTTGAATTTTCGTGGT
CCATAGACAAGTCACTAAAAACAAACAAAATGAAAATGACAGTGGACTGA
GAGTCTTTTTGATTATTTGCAGGTAATTGACTACGTTCAATATCCGTTGA
GATGATACAACTGGAAGTCTGAAACCACACAAAAGCCAAACCAAGGTACA
CGAGAAGTGAGTTCTGAATCACAAATGAAGGAAACACATGGCCTAGAGGA
TAAAATACAAAGCTGAGATACAATGGTGCAAAAGCAATATATATATTTGC
TGGAGATATTCAGCAGTGCAAGTCATGAAAGGAAATCCGCTATTGAGACC
CTGCGCCACCAGCGACTGCAGATCCTTCAACAATTGTTTCATCTCCTGAT
TTCCAAACAACATCTTTCAGCCCAGTCGAAAGGTTTTTGTAAAACTTGTG
AAATTCTAAGGTATCTCCTCCAGATTTTCGAAGCTCAACCATGTAAAGTG
AAGGGGCCACCTCAAAAATCTCTGTTGCAACAGATAAATGACCCTTGCGT
CCAGTTTTTTCCCCTTGAAGCTTCAACTTGAAATTATTTTTCTTCACATC
AAAACCCAAAGGCGATGCAGCTTCCTCAATTTTCGATATAATTTCGTTAA
CAGGACGTTTGG
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