DN617442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.528e-41 Identity = 81/85 (95.29%), Postives = 83/85 (97.65%), Query Frame = -1 Query: 267 HSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 521 HSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSG+AVRERIIRAF Sbjct: 11 HSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.528e-41 Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = -1 Query: 267 SGHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 527 S HSYATKSNQHR+VKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL RNRRTVNRAYGGVLSG+AVRERIIRAF Sbjct: 9 SRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.405e-41 Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = -1 Query: 267 HSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 521 HSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSG AVRERIIRAF Sbjct: 11 HSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.807e-41 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = -1 Query: 267 SGHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 527 S HSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSG+AVRERIIRAF Sbjct: 9 SRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.916e-40 Identity = 78/87 (89.66%), Postives = 81/87 (93.10%), Query Frame = -1 Query: 267 SGHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 527 S HSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPAEYKRSRL RN RTVNRAYGGVLSG AVRERI+RAF Sbjct: 9 SRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34_DICDI (60S ribosomal protein L34 OS=Dictyostelium discoideum GN=rpl34 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.625e-17 Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = -1 Query: 267 SYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 518 SY T SN ++VKTPGG+LVYQ K P+C G + GIP LRP +YK LP++RRTV+RAYGG VR RI+RAF Sbjct: 12 SYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYK--NLPKSRRTVSRAYGGSKCAKCVRNRIVRAF 93
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.477e-17 Identity = 43/84 (51.19%), Postives = 59/84 (70.24%), Query Frame = -1 Query: 267 SYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 518 +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RL N++TV RAYGG LS AV++RI+RAF Sbjct: 12 AYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.902e-16 Identity = 42/84 (50.00%), Postives = 58/84 (69.05%), Query Frame = -1 Query: 267 SYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 518 +Y T+SN+ R++KTPG + Y KK + P+C TG +QGIP LRP E+ +RL N++ V RAYGG LS AV++RI+RAF Sbjct: 12 AYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34_AEDTR (60S ribosomal protein L34 OS=Aedes triseriatus GN=RpL34 PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 8.444e-16 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = -1 Query: 267 SYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 518 SY TKSN+ RVV+TPGG+LVY KK+ + PKC +++ GI RP+E R R+ R +TV R +GGVL +RERIIRAF Sbjct: 12 SYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93
BLAST of DN617442 vs. ExPASy Swiss-Prot
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 8.444e-16 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = -1 Query: 267 SYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGAAVRERIIRAF 518 SY TKSN+ RVV+TPGG+LVY KK+ + PKC +++ GI RP+E R R+ R +TV R +GGVL +RERIIRAF Sbjct: 12 SYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93 The following BLAST results are available for this feature:
BLAST of DN617442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617442 ID=DN617442; Name=DN617442; organism=Citrus sinensis; type=EST; length=530bpback to top |