DN617432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34 Identity = 76/120 (63.33%), Postives = 82/120 (68.33%), Query Frame = -3 Query: 213 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWD-YSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKAPAT 569 RDFGS ATQFGSGWAWL Y+ P P E D L+V+K+PNAVNPLVW Y LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 128 RDFGSFVKFLDEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.397e-31 Identity = 69/116 (59.48%), Postives = 77/116 (66.38%), Query Frame = -3 Query: 222 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 569 RDFGS ATQFGSGWAWL YK ++K L +VKTPNA NPLV Y+ LLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL+ A A Sbjct: 103 RDFGSYDAFVKEFKAAAATQFGSGWAWLAYKP----------------EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 120.939 bits (302), Expect = 4.291e-27 Identity = 66/116 (56.90%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 222 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 569 RDF S ATQFG+GWAWL Y ++ L VVKTPNAVNPLV LLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE AKA Sbjct: 112 RDFTSYEKFYEEFNAAAATQFGAGWAWLAYS------------------NEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.081e-20 Identity = 53/113 (46.90%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 228 DFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 566 DFGS ATQFGSGWAWLV + +L V KT NA NP+ + LLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L A Sbjct: 105 DFGSFDAFVEAFKQAGATQFGSGWAWLVLD------------------NGTLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.478e-19 Identity = 52/109 (47.71%), Postives = 61/109 (55.96%), Query Frame = -3 Query: 237 FGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 563 FGS ATQFGSGWAWLV + +L V KTPNA NPLV LLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 107 FGSLDKFKEEFSNAAATQFGSGWAWLV------------------DDGGTLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.931e-19 Identity = 52/115 (45.22%), Postives = 62/115 (53.91%), Query Frame = -3 Query: 222 DFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 566 DFGS ATQFGSGWAWLV + +L + KT NA P+ + LLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S A A Sbjct: 105 DFGSFENFVTEFKQAAATQFGSGWAWLVLD------------------NGTLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.301e-19 Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = -3 Query: 237 FGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 563 FGS A QFGSGWAWLV + D +L + KT N VNPL + ++LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 109 FGSVAKFKEDFAAAGAGQFGSGWAWLV-----------------KDSDGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 4.755e-18 Identity = 46/105 (43.81%), Postives = 59/105 (56.19%), Query Frame = -3 Query: 255 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 569 +DFGS ATQFGSGWAWL+ + +L V KTPNA NPL +LLT+DVWEHAYY+DF+N RP +I ++D LV+W+ Sbjct: 105 QDFGSFDKLKEEFSNAAATQFGSGWAWLI------------------DDGGTLKVTKTPNAENPLAHGQKALLTLDVWEHAYYIDFRNARPAFIKNYLDNLVNWD 191
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 41/111 (36.94%), Postives = 57/111 (51.35%), Query Frame = -3 Query: 237 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 569 +DFGS QFGSGWAWL+Y D L ++KT NA P+ LL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 115 KDFGSFEEFCEQFKQEAVGQFGSGWAWLIYH------------------DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of DN617432 vs. ExPASy Swiss-Prot
Match: SODF_RICFE (Superoxide dismutase [Mn/Fe] OS=Rickettsia felis GN=sodB PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.026e-17 Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = -3 Query: 237 RDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 569 +DFGS QFGSGWAWLVY D L ++KT NA P+ LL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 115 KDFGSFEGFCEQFKQEAVGQFGSGWAWLVYH------------------DNRLQIIKTANAGTPIANGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207 The following BLAST results are available for this feature:
BLAST of DN617432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617432 ID=DN617432; Name=DN617432; organism=Citrus sinensis; type=EST; length=571bpback to top |