DN617429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617429 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.958e-43 Identity = 87/116 (75.00%), Postives = 96/116 (82.76%), Query Frame = -3 Query: 247 FIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVIS-----VTENG-EGNESNRLMRYAAMFMSIRPHDHLE 576 F+DRLP SSATF C+E+IEAF L +++LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQ AWRR R RTRG I V+EN EGN RL++YAAMFMSIRPHDHLE Sbjct: 611 FLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIGGSMSPVSENSIEGNSERRLLQYAAMFMSIRPHDHLE 726
BLAST of DN617429 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 1.558e-24 Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = -3 Query: 259 FIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYR----------MRTRGPVISVTENGEGNESNRLMRYAAMFMSIRPH 576 F++RLP SS+T +E+ EAFGLDA++++Y+T HFRY F NE++KR+ARYYS WRTWAAV +Q AWRRY+ +R R P+ GE ++L YAA+ S +P+ Sbjct: 576 FVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLGE----DKLRLYAAILTSPKPN 687
BLAST of DN617429 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = -3 Query: 283 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNESNRLMRYAA 564 LP+S+ T +E +EAF L A +L+++ + FR + +++L+ T RYYS WRTWAA +Q AWRRY+ + +S+ E+ + + AA Sbjct: 567 LPSSTRTVRALEEVEAFALQAGDLKFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLSLAESFSSYDEEEAVAVAA 659
BLAST of DN617429 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 310 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNE 564 LP+S+ T + +EAF L A++L+++ + FR + +++L+ T R+YS +WRTWAA IQ AWRRY+ R ++ E+ E E Sbjct: 567 LPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEE 650
BLAST of DN617429 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11 Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = -3 Query: 319 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGE 564 LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+YS WRTWA+ IQ AWRRY R + + E E Sbjct: 588 LPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRRIEEKEE 668 The following BLAST results are available for this feature:
BLAST of DN617429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617429 ID=DN617429; Name=DN617429; organism=Citrus sinensis; type=EST; length=578bpback to top |