DN617420

Overview
NameDN617420
Unique NameDN617420
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.687e-23
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLD 513
            M+ K I E   K LL +++   + +  +   A+VT  TD++ L    PWL S  LVVKPD L  +RGK GLV +NL L  V  ++K RLG E  +G  KG +  F++EPFVPH+Q  E+Y+ I + R G  + F   GG+++ +   K + + +  ++ +  +
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDTKAQKLLVGVDEKLNAE 163          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.204e-23
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHMTLD 513
            M+ K I E   K LL +++   + +  +   A+VT  TD++ L    PWL S  LVVKPD L  +RGK GLV +NL L  V  ++K RLG E  +G  KG +  F++EPFVPH+Q  E+Y+ I + R G  + F   GG+++ +   K + + +  ++ +  +
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWAHLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLSLDGVKSWLKPRLGHEATVGKAKGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNTE 163          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.428e-22
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHM 504
            M+ K I E   K LL +++   + +  +   A+VT  TD++ L    PWL S  LVVKPD L  +RGK GLV +NL L  V  ++K RLG E  +G   G +  F++EPFVPH Q  E+Y+ I + R G  + F   GG+++ +   K + + +  ++ +
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVAVDEKL 160          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHM 504
            M+ K I E   K LL + +   + +  +   A+VT  TD++ L    PWL S  LVVKPD L  +RGK GLV +NL L  V  ++K RLG E  +G   G +  F++EPFVPH+Q  E+Y+ I + R G  + F   GG+++ +   K + + +  ++ +
Sbjct:    1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKL 160          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.437e-22
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTEKHM 504
            M+ K I E   K LL +++   + +  +   A+VT  TD++ L    PWL S  LVVKPD L  +RGK GL+ +NL L  V  ++K RLG E  +G   G +  F++EPFVPH Q  E+Y+ I + R G  + F   GG+++ +   K + + +  ++ +
Sbjct:    1 MSAKAISEQTGKELLYKYICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQSLVVKPDQLIKRRGKLGLIGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHTQEEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKL 160          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACL2_SCHPO (Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces pombe GN=SPAC22A12.16 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.931e-19
Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLD------------LQICSAQV--------TESTDFSELTN--------KEPWLSSSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPH--NQEYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLP---TEKHMTLDACAPLIATLPLE 549
            M+ K IREYD K +L   L R   +             +Q+   Q          EST + E+          + PW+  ++LV KPD L  +RGKSGL+ LN    +  E+++ R G   ++    G +TTF+VEPFVPH  N EYY++I S R G  I F   GG+++ +   K + + +P   +E        + L++ +P+E
Sbjct:    1 MSAKSIREYDGKAVLAYWLNRSPSISKEEYKTVSATPAVQLAQIQFPLPTLVIPAESTTYREVVEDVFAKVEQEHPWVKETKLVAKPDQLIKRRGKSGLLKLNATWDEAKEWIRERAGKNQKVQHAVGYLTTFLVEPFVPHPPNTEYYININSVREGDWILFCNEGGVDVGDVDAKARKLLVPVRLSEFPSRATIASTLLSDIPVE 206          
BLAST of DN617420 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.432e-14
Identity = 53/158 (33.54%), Postives = 85/158 (53.80%), Query Frame = 1
Query:   31 MARKKIREYDSKRLLKEHLKRLAGLDLQICSAQVTESTDFSELTNKEPWLS-SSRLVVKPDMLFGKRGKSGLVALNLDLAQVAEFVKGRLGTEVEMGGCKGPITTFIVEPFVPHNQ--EYYLSIVSDRLGCTISFSECGGIEIEENWDKVKTIFLPTE 495
            M+ K + E   K +L ++ +  +GL     +  V    +F E+ NK  WL+  ++ V+KPD L  +RGK GLV +       A F K    + V +G  +G + TFIVEPF  H +  E Y++I S+R    I F E GG++I +  +K +T+ +P +
Sbjct:    1 MSAKAVSELSGKEVLYKYFEP-SGLLSAPHAFHVKAGENFDEIANKYEWLARDNKGVIKPDQLIKRRGKLGLVKIGTPQELKAWFEKTG-DSYVRVGQTEGRLHTFIVEPFCAHTEKDEMYIAIYSERFRDVIMFYEQGGVDIGDVEEKARTVSVPVQ 156          
The following BLAST results are available for this feature:
BLAST of DN617420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ACLY_RAT1.687e-2336.20ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACLY_MOUSE2.204e-2336.20ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACLY_SHEEP1.428e-2236.25ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_HUMAN2.437e-2236.25ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_BOVIN2.437e-2235.63ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACL2_SCHPO1.931e-1931.55Probable ATP-citrate synthase subunit 2 OS=Schizos... [more]
ACLY_CAEEL1.432e-1433.54Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01C23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617420 ID=DN617420; Name=DN617420; organism=Citrus sinensis; type=EST; length=569bp
GTCTGAACTAGGTATTGAGTTGTATTTGATATGGCTAGGAAGAAGATCAG
AGAGTATGATTCTAAGAGACTTTTGAAAGAGCACTTGAAGCGTCTTGCTG
GCCTCGACCTTCAGATCTGCTCTGCTCAGGTGACAGAATCTACGGACTTC
TCTGAGTTGACAAACAAAGAACCATGGCTTTCATCCTCAAGATTGGTTGT
GAAACCCGATATGTTGTTTGGGAAACGTGGGAAGAGTGGTTTGGTGGCAT
TGAATTTAGATCTAGCTCAAGTGGCTGAATTTGTCAAAGGACGCCTTGGT
ACAGAGGTTGAGATGGGCGGTTGCAAGGGACCAATAACTACCTTTATCGT
TGAACCATTTGTCCCTCACAACCAAGAGTACTATCTTTCAATAGTCTCCG
ATAGGCTTGGATGCACCATTAGCTTCTCAGAGTGTGGGGGTATTGAAATT
GAAGAGAACTGGGACAAGGTGAAAACAATATTCCTTCCGACAGAGAAACA
TATGACACTGGATGCATGTGCTCCTTTGATAGCCACACTTCCTTTGGAGT
TTCGTGGAAAAATTGGTGA
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