DN617347

Overview
NameDN617347
Unique NameDN617347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5714 contig Csv1_Contig5714:1..652. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496I_ARATH (UPF0496 protein At2g18630 OS=Arabidopsis thaliana GN=At2g18630 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.974e-56
Identity = 107/176 (60.80%), Postives = 141/176 (80.11%), Query Frame = 3
Query:  117 APSPPLEVITDAQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLF 644
            +PS P+++  +++Y+  LS YE AC  DP L+SFD+ + ERT+RVI+KL++GVE+ SLSFDSL+EVT  LL+MNQ+VVKVIL+ K+DIWNNQDLF LV  YFE++ KT+DFC+ LENCL RAR SQ+IIQ AV QF+EE    E  + ++Y +TLEELK+FK AG+PFT+EFF LF
Sbjct:   16 SPSTPVQIKINSEYTEHLSSYERACSEDPKLESFDSALHERTNRVINKLASGVEIKSLSFDSLREVTQCLLDMNQDVVKVILQDKEDIWNNQDLFSLVNLYFESTAKTMDFCSELENCLNRARRSQVIIQFAVNQFEEE---NEDKENRKYEKTLEELKRFKVAGEPFTKEFFALF 188          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496A_ORYSJ (UPF0496 protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0199100 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.376e-54
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 3
Query:  150 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVE-------LQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            A  + +LS YEAACR DP+L++FD T+Q RTSR I  L+ GVEV SLS +SL+EVTG LL+MNQEVV+VIL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E +        ++     RY RTL EL++FK AGDPFTEEFF  FQ+
Sbjct:   26 AAAAEELSSYEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRVILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEEDNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQA 199          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496A_ORYSI (UPF0496 protein 1 OS=Oryza sativa subsp. indica GN=OsI_010151 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.376e-54
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 3
Query:  150 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVE-------LQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            A  + +LS YEAACR DP+L++FD T+Q RTSR I  L+ GVEV SLS +SL+EVTG LL+MNQEVV+VIL+CKKDIW + +LF LVEDYFE+S+ TLDFCT L+ CLKRAR+SQL++ +A+++FD+E +        ++     RY RTL EL++FK AGDPFTEEFF  FQ+
Sbjct:   26 AAAAEELSSYEAACRSDPELRTFDTTLQRRTSRAISTLAVGVEVRSLSLESLREVTGCLLDMNQEVVRVILDCKKDIWKSPELFDLVEDYFESSLHTLDFCTALDKCLKRARDSQLLLHVALQRFDDEEDNDAAAAGQEDAAPSARYARTLHELRQFKAAGDPFTEEFFSAFQA 199          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496A_ARATH (UPF0496 protein At4g34320 OS=Arabidopsis thaliana GN=At4g34320 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.121e-51
Identity = 103/165 (62.42%), Postives = 126/165 (76.36%), Query Frame = 3
Query:  156 YSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            Y+ +L  Y AAC+ D +LQSFD  +Q RTS VI  L+ GVEV +LSFDSLKEVT  LLEMNQEVVKVIL+CKKDIW NQ++F LVEDYFE S+KTLDFC  LE  L+RAR+S L+I +A++QF++E  +Q G     Y +TLEELK FKDA  PF E+FF +FQS
Sbjct:   19 YTTELRSYAAACKADTELQSFDTCLQARTSHVISTLATGVEVRALSFDSLKEVTQCLLEMNQEVVKVILDCKKDIWKNQEMFELVEDYFENSLKTLDFCAALEKGLRRARDSHLLILVALQQFEDESLVQGG---NGYKKTLEELKNFKDAESPFNEDFFKMFQS 180          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496H_ARATH (UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.882e-49
Identity = 96/179 (53.63%), Postives = 134/179 (74.86%), Query Frame = 3
Query:  129 PLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVDE---KRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            P ++ TD  + YSADL+ Y +ACR DPDLQSFD+++ +RT+RVI+ L++G +  SLSFD+L EV+G LLEMNQEVV+ I+E K+D+W+N+DL  LV  YF++SIKTLDFC  ++NC+KRAR  Q+++Q A+KQF+ E        E    +Y +TLEEL KFK +GDPF  +FF+L +S
Sbjct:   27 PQQIRTDMGSLYSADLTAYNSACREDPDLQSFDSSLHQRTNRVINSLASGAQTRSLSFDALIEVSGCLLEMNQEVVRFIIESKEDVWDNKDLTCLVNAYFDSSIKTLDFCNAVDNCVKRARIGQMLLQFALKQFEMESSGSNKSVEPGTNKYAKTLEELNKFKASGDPFDGDFFMLLES 205          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496F_ARATH (UPF0496 protein At5g66660 OS=Arabidopsis thaliana GN=At5g66660 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.512e-43
Identity = 92/180 (51.11%), Postives = 126/180 (70.00%), Query Frame = 3
Query:  126 PPLEVITD--AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFD-EEVELQEGVD--EKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            P  EV TD  ++YS+DLS Y +AC+ D +L+SFD+++ +RT+ +I  L+A  E  SL+ DSL EV G LLE+NQ  V+VI+E ++D+W N+DL  LV+ YF+++ KTLDFC  +ENC+KR   SQLII+ AVKQF+ E V+   G D  +K+Y +TLEEL KFK  GDPF  E    F S
Sbjct:   26 PVKEVRTDMRSKYSSDLSSYTSACKKDSNLKSFDSSLHQRTNIIITSLAARAETQSLNLDSLMEVYGFLLELNQNAVRVIIESREDVWKNKDLKSLVDVYFKSTSKTLDFCNTVENCVKRTEISQLIIRFAVKQFEAESVDTDLGGDKKKKKYTKTLEELNKFKAMGDPFDGELVTQFDS 205          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496E_ORYSJ (Putative UPF0496 protein 5 OS=Oryza sativa subsp. japonica GN=Os10g0359200 PE=3 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.622e-42
Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = 3
Query:  177 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            YEAAC  DP+L +FD  ++ R SR I  +++GVEV SLS  SL+EVTG LL+MNQEVV+V+L+CK+D+W + DLF LVEDYFE S+ TLDF   L+  L RAR+SQL++ LA+++   E        E  Y  TL EL++FK AG+PFT+EFF  FQ+
Sbjct:   33 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRVVLDCKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLALQRHHHEPPAAASASE-LYASTLGELRQFKAAGEPFTDEFFAAFQT 189          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496E_ORYSI (Putative UPF0496 protein 5 OS=Oryza sativa subsp. indica GN=OsI_032118 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.721e-42
Identity = 85/159 (53.46%), Postives = 112/159 (70.44%), Query Frame = 3
Query:  177 YEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVD-EKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            YEAAC  DP+L +FD  ++ R SR I  +++GVEV SLS  SL+EVTG LL+MNQEVV+V+L CK+D+W + DLF LVEDYFE S+ TLDF   L+  L RAR+SQL++ LAV++   E          + Y  TL EL++FK AG+PFT+EFF  FQ+
Sbjct:   36 YEAACSADPELGTFDTALRRRASRAITAVASGVEVRSLSLGSLREVTGCLLDMNQEVVRVVLACKRDVWRSPDLFDLVEDYFEGSLHTLDFLAALDKSLHRARDSQLVLHLAVQRHHHEPPAAAAASASELYASTLGELRQFKAAGEPFTDEFFAAFQT 194          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496B_ARATH (UPF0496 protein At4g34330 OS=Arabidopsis thaliana GN=At4g34330 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.903e-41
Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 3
Query:  156 YSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEEVELQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            Y+ +L  YEAAC+ D ++QSFD  +Q RTS VI  L+ GVEV SLSFDSLK V GSLL+MNQEV KVIL+CKKDIW NQ++F  VE YFETS+KTLDF   L+  L+  + + L I                +D   Y +TL+ELK+FKDA  PF ++FF +FQS
Sbjct:   17 YTTELRSYEAACKEDMEIQSFDTRMQARTSHVISTLATGVEVRSLSFDSLKAVIGSLLDMNQEVAKVILDCKKDIWKNQEMFEFVEAYFETSLKTLDFFNALKRGLQGVQINHLFI----------------LDGNGYKKTLQELKRFKDADRPFDQDFFKMFQS 165          
BLAST of DN617347 vs. ExPASy Swiss-Prot
Match: U496G_ARATH (UPF0496 protein At5g66670 OS=Arabidopsis thaliana GN=At5g66670 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 84/170 (49.41%), Postives = 119/170 (70.00%), Query Frame = 3
Query:  150 AQYSADLSLYEAACRLDPDLQSFDATIQERTSRVIHKLSAGVEVHSLSFDSLKEVTGSLLEMNQEVVKVILECKKDIWNNQDLFGLVEDYFETSIKTLDFCTVLENCLKRARNSQLIIQLAVKQFDEE---VELQEGVDEKRYVRTLEELKKFKDAGDPFTEEFFVLFQS 650
            +QYS+DLS Y +AC+    L+SFD+ + ERT+ +I  L+A  +  SL+ +SL EV G LLE+NQ+ V+VI+E K+D+  N DL  LV+ YF+++ KTLDFC  +E C+K+A  SQLII+ AVKQF+ E    +L E   +K+YV+TLEE+ KFK  GDPF  EF   ++S
Sbjct:   36 SQYSSDLSSYASACKKYSSLKSFDSLLHERTNSIISSLAAQAKTRSLNIESLMEVYGYLLELNQDTVRVIIESKEDVLKNNDLKALVDVYFKSTSKTLDFCNTVEKCVKKAEISQLIIRFAVKQFETETVDTDLGES-KKKKYVKTLEEMNKFKAMGDPFDGEFVTQYKS 204          
The following BLAST results are available for this feature:
BLAST of DN617347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
U496I_ARATH1.974e-5660.80UPF0496 protein At2g18630 OS=Arabidopsis thaliana ... [more]
U496A_ORYSJ5.376e-5459.20UPF0496 protein 1 OS=Oryza sativa subsp. japonica ... [more]
U496A_ORYSI5.376e-5459.20UPF0496 protein 1 OS=Oryza sativa subsp. indica GN... [more]
U496A_ARATH1.121e-5162.42UPF0496 protein At4g34320 OS=Arabidopsis thaliana ... [more]
U496H_ARATH8.882e-4953.63UPF0496 protein At5g66675 OS=Arabidopsis thaliana ... [more]
U496F_ARATH9.512e-4351.11UPF0496 protein At5g66660 OS=Arabidopsis thaliana ... [more]
U496E_ORYSJ1.622e-4253.80Putative UPF0496 protein 5 OS=Oryza sativa subsp. ... [more]
U496E_ORYSI4.721e-4253.46Putative UPF0496 protein 5 OS=Oryza sativa subsp. ... [more]
U496B_ARATH8.903e-4153.33UPF0496 protein At4g34330 OS=Arabidopsis thaliana ... [more]
U496G_ARATH2.864e-3949.41UPF0496 protein At5g66670 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01B10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617347 ID=DN617347; Name=DN617347; organism=Citrus sinensis; type=EST; length=652bp
TTGCATGGTTTGCTTTTATTGAAGGATCAAAGTAAGAGAAATTCTTATCA
CCTTTGTCATTTCAGCTGAAATTCAGTATGATGGGAGGACAATCTAGCAA
GAAGAAAGGTGGTGATGCACCATCGCCACCTCTTGAAGTGATCACTGATG
CCCAATATTCAGCTGACCTTAGCTTGTATGAGGCTGCATGTAGACTTGAT
CCTGACTTGCAATCCTTTGACGCCACCATTCAAGAGCGTACTAGCCGTGT
TATCCACAAGCTTTCAGCTGGTGTTGAGGTCCATTCCTTATCTTTTGACT
CACTCAAAGAGGTCACTGGGTCTCTTCTTGAAATGAATCAAGAAGTGGTC
AAAGTCATTCTAGAATGCAAGAAAGATATATGGAACAATCAAGATTTGTT
TGGTTTGGTTGAGGACTACTTTGAGACTAGTATCAAGACTTTGGATTTTT
GCACTGTTCTAGAGAATTGCCTTAAGCGTGCTAGAAACAGTCAATTAATT
ATTCAGCTTGCAGTTAAGCAATTCGACGAAGAAGTAGAATTACAGGAGGG
GGTTGATGAGAAGAGGTATGTGAGGACATTGGAGGAATTAAAGAAGTTTA
AGGATGCCGGGGACCCATTTACAGAAGAGTTCTTTGTGTTGTTTCAATCA
GT
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