DN617318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617318 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 55/171 (32.16%), Postives = 100/171 (58.48%), Query Frame = 3 Query: 168 NCFVSLPLKLIETL------ESTRSAHLLPQVLSLELRSRSNQRWVVAWSGATSSSSF---IEVARQFAECIS-LADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRR 650 +CFVSLP K++ +L +S L ++ + ++ + V W+G ++ F IE++++ A+C+ + + ++++ ++N+ A V +EPLT DDWE++E++ ++ E +LNQV I++ P+W+H +TII V T P PVV+L +E+ VAPK R Sbjct: 12 DCFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVGWAGGSTDPRFTDSIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIMEVHQQYLEEQLLNQVNILYSGQIVPIWIHHKTIIKLKVTETLP-TPVVKLSSNSEIIVAPKPR 181
BLAST of DN617318 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 168 NCFVSLPLKLIETLESTRSAHLLPQVLSLELRSRSNQR---WVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK 653 +CF+ LP +L+ L HLL Q ++E+ S WV S + E+ RQ + + L+ V +R S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV P+W+ +T I +V+ P P +L T++ + PK R+ Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVASDHQPTYLSWVEGRHFNDQSENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVTLMPAAPYGRLETNTKLLIQPKTRQ 183
BLAST of DN617318 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 52/178 (29.21%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 168 NCFVSLPLKLIETLESTRSAHLLPQVLSLEL---RSRSNQRWVVAWSGATSSSSFIEVARQFAECISLADHTIVQVRVVSNVLKATLVTIEPLTEDDWEVLELNSEHAEAAILNQVRIVHEAMRFPLWLHGRTIITFHVVSTFPKKPVVQLVPGTEVAVAPKRRK---NNVKKHEDSY 683 +CF+ LP +L+ L HLL Q ++E+ + WV + + E+ RQ + + L++ V ++ S+V+ V +EPL+ DDWE+LEL++ E +L+Q+RIV FP+W+ +T I +V+ P +L T++ + PK R+ N K + Y Sbjct: 26 DCFLHLPRRLVAQL------HLL-QNQAIEVVWSHQPAFLSWVEGRHFSDQGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENTFSKADAEY 196 The following BLAST results are available for this feature:
BLAST of DN617318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617318 ID=DN617318; Name=DN617318; organism=Citrus sinensis; type=EST; length=727bpback to top |