DN135273

Overview
NameDN135273
Unique NameDN135273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:117..695. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.886e-23
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MSDTCGNCDCAD+ QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.206e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  100 TCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 291
            TCGNCDC D+ QCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 285
            MSD CGNCDCAD  QCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.009e-16
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MS  C NCDCAD  QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.848e-16
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 285
            MS  C NCDC+D  QC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MSD CGNCDCAD+ QCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MSD CGNCDCAD+ QCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.761e-13
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MSD CGNCDCAD+ QCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DN135273 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.809e-12
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   91 MSDTCGNCDCADRGQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 288
            MSD CG+CDCAD+ QCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DN135273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA3.886e-2369.70Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC2.206e-1859.38Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE2.882e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MALDO6.009e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3_PRUAV7.848e-1656.92Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3A_ORYSJ2.982e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI2.982e-1553.03Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ4.761e-1348.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.809e-1246.97Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionwca08h06 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135273 ID=DN135273|Name=DN135273|organism=Citrus sinensis|type=EST|length=579bp
GGCCGGGGATCCTGCAATGCAAAGCAAGTTTCGTACAATAAAGAGCCCTC
TATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGACA
CCTGCGGCAACTGCGACTGCGCTGACAGGGGCCAGTGCGTGAAGAAGGGA
AGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCAC
CGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAAGT
GCGGCCCCACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAA
GCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTG
TGGGGGTTAAGAATAATGTAAGGGTGATTAAAAAAAAAAGAAAGATTCTC
TACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTG
TTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCAT
GTAATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTTAATTTTAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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