DN135242

Overview
NameDN135242
Unique NameDN135242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.014e-69
Identity = 123/209 (58.85%), Postives = 154/209 (73.68%), Query Frame = 3
Query:   69 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            E P S+DWRK+G V  VKDQG CGSCW+FST GA+EGIN +VTGDLI+LSEQELVDCDT+ + GC+GG MDYAFE++I NGGIDT+ DYPY GVDGTC+  ++  KVV+ID Y+DV   S+ +L  A   QPIS+ +      FQLY SGI++G C      +DH V+ VGYG+ENG+DYWIV+NSWG SWG  GY  + R+ +   GK
Sbjct:  136 ELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQ---LDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGK 341          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 8.033e-67
Identity = 118/207 (57.00%), Postives = 149/207 (71.98%), Query Frame = 3
Query:   75 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            P S+DWR +G V  +KDQG CGSCW+FS   A+EGIN +VTGDLISLSEQELVDCDT+ + GC+GG MDYAF+++INNGGIDTE DYPY G D  C++ ++  KVV+ID Y+DV P S+++L  A   QP+SV +      FQLY+SGI+ G C      +DH V  VGYG+ENG+DYWIV+NSWG SWG  GY  + R+     GK
Sbjct:  130 PESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGT---ALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGK 333          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 8.882e-66
Identity = 116/215 (53.95%), Postives = 150/215 (69.77%), Query Frame = 3
Query:   30 NAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD 668
            N        V   E P ++DWR++G V P+KDQG+CGSCW+FSTT A+EGIN +VTG+LISLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G  G CN   + ++VVSIDGY+DV   D   L  A+  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWG  WG +GY  + R+
Sbjct:  131 NVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTN---LDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERN 342          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.515e-65
Identity = 117/222 (52.70%), Postives = 153/222 (68.92%), Query Frame = 3
Query:   30 NAKSNLHKTVQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            N        V   E P ++DWR++G V  +KDQG+CGSCW+FST  A+EGIN +VTG+L+SLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G +G CN   + ++VV+IDGY+DV   D   L  AV  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWGT WG DGY  + R+ +   GK
Sbjct:   86 NVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTN---MDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGK 304          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 243.817 bits (621), Expect = 6.365e-64
Identity = 113/210 (53.81%), Postives = 148/210 (70.48%), Query Frame = 3
Query:   69 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            E P S+DWR++G V PVK+QG CGSCW+FS    +E IN LVTG++I+LSEQELV+C T   + GC+GG MD AF+++I NGGIDTE DYPY  VDG C+I +E  KVVSIDG++DV  +D   L  AV  QP+SV +     +FQLY SG+++G C      +DH V+ VGYG++NG+DYWIV+NSWG  WG  GY  + R+ +   GK
Sbjct:  140 ELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGK 346          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 7.781e-62
Identity = 110/206 (53.40%), Postives = 147/206 (71.36%), Query Frame = 3
Query:   75 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYG 686
            P S+DWRK+G V  VK+QGSCGSCW+FST  A+EGIN +VTG+L +LSEQEL+DCDTT + GC+GG MDYAFE+++ NGG+  E DYPY+  +GTC + K+E++ V+I+G++DV  +D  +LL A   QP+SV +  S  +FQ Y+ G+++G C  D   +DH V  VGYGS  G DY IVKNSWG  WG  GY  + R+T    G
Sbjct:  139 PKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVD---LDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEG 341          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.327e-61
Identity = 111/208 (53.37%), Postives = 141/208 (67.79%), Query Frame = 3
Query:   69 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYG 686
            + P S+DWRK+G V PVKDQG CGSCW+FST  A+EGIN + TG+L SLSEQEL+DCDTT + GC+GG MDYAF+++I+ GG+  E DYPY   +G C   KE+ + V+I GY+DV E  D +L+ A   QP+SV +  S  DFQ Y  G++NG C  D   +DH V  VGYGS  G DY IVKNSWG  WG  G+  + R+T    G
Sbjct:  136 DLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTD---LDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEG 340          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.327e-61
Identity = 113/206 (54.85%), Postives = 144/206 (69.90%), Query Frame = 3
Query:   75 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYG 686
            P S+DWR++G++  VKDQGSCGSCW+FS   A+E INA+VTG+LISLSEQELVDCD + + GCDGG MDYAFE+VI NGGIDTE DYPY   +G C+  ++  KVV ID Y+DV   ++ AL  A   QP+S+ +     DFQ Y SGI+ G C      +DH V+I GYG+ENG DYWIV+NSWG +   +GY  + R+ S   G
Sbjct:   19 PESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGT---AVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSG 221          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.327e-61
Identity = 114/210 (54.29%), Postives = 144/210 (68.57%), Query Frame = 3
Query:   75 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITK-EETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            P  +DWR  G V  VKDQG+CGSCW+FS  GA+EGIN + TG+LISLSEQELVDCD    + GCDGG M+YAFE+++ NGGI+T+ DYPY   D G CN  K   T+VV+IDGY+DV   D   L  AV  QP+SV +  S+  FQLY SG+  G C      +DH V++VGYGS +GEDYWI++NSWG +WG  GY  + R+    +GK
Sbjct:  131 PDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCG---ISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGK 337          
BLAST of DN135242 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.733e-61
Identity = 111/208 (53.37%), Postives = 146/208 (70.19%), Query Frame = 3
Query:   69 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSXXYGK 689
            + P S+DWR+ G V PVK+QG CGSCW+FST  A+EGIN +VTGDLISLSEQ+LVDC T ++GC GG+M+ AF++++NNGGI++E  YPY G DG CN T     VVSID Y++V   ++ +L  A   QP+SV M  +  DFQLY SGI+ G C+      +HA+ +VGYG+EN +D+WIVKNSWG +WG  GY    R+     GK
Sbjct:    2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCN---ISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGK 205          
The following BLAST results are available for this feature:
BLAST of DN135242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
RD21A_ARATH1.014e-6958.85Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ8.033e-6757.00Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH8.882e-6653.95Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA1.515e-6552.70Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
ORYB_ORYSJ6.365e-6453.81Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
XCP2_ARATH7.781e-6253.40Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH1.327e-6153.37Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSPL_SOLLC1.327e-6154.85Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR1_ARATH1.327e-6154.29Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CPGP2_ZINOF1.733e-6153.37Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionwca08d09 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08d09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135242 ID=DN135242; Name=DN135242; organism=Citrus sinensis; type=EST; length=691bp
TTCAAAAGCCTATTGGCAAAGCGATTGGTAATGCAAAGAGTAACTTGCAC
AAGACGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAG
GGGAATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGT
CGTTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGA
GACCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAG
CTATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTA
ACAACGGTGGAATCGACACAGAATCTGATTATCCTTACACCGGTGTCGAT
GGTACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGG
TTATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTC
AACAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTA
TATACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACAT
TGATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATT
ATTGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATAC
TTTTACATAACAAGGGACACCAGTTTNNNNTATGGTAAATG
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