EY680360

Overview
NameEY680360
Unique NameEY680360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680360 vs. ExPASy Swiss-Prot
Match: PDK1_HUMAN ([Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = 2 
Query:   17 VRDWYLDSFRDLRSFPDIRSTSDER---DFTQMIKAIKVRHNNVVPMMALGLQQLKKEMDPKIVYEDLHEIHQFLDRFYMSRIGIRMLIGQSFLV 292
            V+ WY+ S ++L  F D +S  D +   DFT  +  I+ RHN+V+P MA G+ + K+      V      +  FLDRFYMSRI IRML+ Q  L+
Sbjct:  110 VQSWYIQSLQELLDFKD-KSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVIEYKESFGVDPVTSQ--NVQYFLDRFYMSRISIRMLLNQHSLL 201
The following BLAST results are available for this feature:
BLAST of EY680360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PDK1_HUMAN8.711e-1141.05[Pyruvate dehydrogenase [lipoamide]] kinase isozym... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-C04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680360 ID=EY680360; Name=EY680360; organism=Citrus sinensis; type=EST; length=835bp
ATTTTCTGATGCTTAGGTTCGAGACTGGTATTTGGACTCATTTCGTGATT
TGAGGTCGTTTCCTGACATCAGAAGTACGAGTGATGAGAGGGATTTTACG
CAAATGATTAAGGCGATTAAGGTGAGGCATAATAATGTGGTGCCCATGAT
GGCGTTGGGGCTGCAACAATTGAAGAAAGAGATGGATCCCAAGATTGTTT
ACGAGGATCTTCATGAGATTCATCAGTTTCTGGATCGGTTTTACATGTCT
AGGATCGGAATTCGTATGCTTATTGGTCAGTCTTTTCTTGTCTGTTTCTT
ATTCTGCTGGTCTTTATTGCAATCGACTTTTTTTTCTTCTTGTTGAAGCT
GGGCCTGAATATCTTGTGTGCACTTCAAATTTGGATGAAACTCAGGGCAG
CATGTAGAATTGCACAATCCCAACCCTCCACCTCATTGTATTGGCTACAT
AGACACAAAAATGTCTCCAGTGCAGGTTGCTAGGAATGCTAGTGAGCATG
CACATTGTGTTTGTCTGCGGGAGTATGGCAGTGCACCCGATTTTAATATC
TACGGTGATCCCAGTTTTACATTCCCGTGAGTTCATTTAATTCTCACTGG
ATAACCGTTTTTTCCTTTTTAGTTTCGTTAAGGTTTTTGTTAATACCTTC
TTTCTCTCTCTCCCCCCCCCCCCCTATTTAATGTCCTGCTAGTGATGAAT
TGTCTGGGTTAAAAATGATCGTTCCCCTTCTGTTTTTGTTTTTTTTATTT
ATTATGTAATTTTTCTTTAAGTTTCCTTCCCTTCCCCCTTGGCCTCCCCA
GGGAATTTAAGTTGGGTTAAAAAACCCTTTTACTG
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