DN135126

Overview
NameDN135126
Unique NameDN135126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2919 contig Csv1_Contig2919:612..1314. BLAST: Citrus Unigene V1 Contigs to TAIR9
Homology
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CITSI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Citrus sinensis GN=ndhH PE=3 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 6.938e-114
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    1 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPI 200
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CARPA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Carica papaya GN=ndhH PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 9.704e-108
Identity = 189/200 (94.50%), Postives = 195/200 (97.50%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M+I AT K+  FMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGG+AADLP+GWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    1 MNIPATGKD--FMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGIAADLPHGWIDKCLDFCDYFLTGVAEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_GOSHI (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium hirsutum GN=ndhH PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.655e-107
Identity = 186/200 (93.00%), Postives = 194/200 (97.00%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ ATEK+   MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFLTG+ EYQK ITRNPI
Sbjct:    1 MNLSATEKD--LMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWLDKCLDFCDYFLTGIVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_GOSBA (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Gossypium barbadense GN=ndhH PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.655e-107
Identity = 186/200 (93.00%), Postives = 194/200 (97.00%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ ATEK+   MIVNMGPHHPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGW+DKCLDFCDYFLTG+ EYQK ITRNPI
Sbjct:    1 MNLSATEKD--LMIVNMGPHHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWLDKCLDFCDYFLTGIVEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_CHLSC (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Chloranthus spicatus GN=ndhH PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.655e-107
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 3 
Query:  102 MSILATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            M++ AT   K+ MIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVN PEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLP+GW+DKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    1 MTVPATSTRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELLYDLFEAATGMRMMHNYFRIGGVAADLPHGWVDKCLDFCDYFLTGVAEYQKLITRNPI 200
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_TOBAC (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nicotiana tabacum GN=ndhH PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.830e-106
Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 3 
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A    K+ MIVNMGP HPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    3 APTTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SOLTU (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Solanum tuberosum GN=ndhH PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.830e-106
Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 3 
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A    K+ MIVNMGP HPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    3 APTTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_SOLLC (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Solanum lycopersicum GN=ndhH PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.830e-106
Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 3 
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A    K+ MIVNMGP HPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    3 APTTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_NICSY (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Nicotiana sylvestris GN=ndhH PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.830e-106
Identity = 183/196 (93.37%), Postives = 189/196 (96.43%), Query Frame = 3 
Query:  114 ATEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            A    K+ MIVNMGP HPSMHGVLRLIVTLDGEDV+DCEPILG+LHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAIT+NGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFREREL+YDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQK ITRNPI
Sbjct:    3 APTTRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVVDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITINGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPI 198
[Close]
BLAST of DN135126 vs. ExPASy Swiss-Prot
Match: NDHH_EUCGG (NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhH PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.830e-106
Identity = 183/195 (93.85%), Postives = 189/195 (96.92%), Query Frame = 3 
Query:  117 TEKEKEFMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGHLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIRVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTGVAEYQKXITRNPI 701
            T   K+ MIVNMGPHHPSMHGVLRLI+TLDGEDVIDCEPILG+LHRGMEKIAENRT+IQYLPYVTRWDYLATMFTEAITVNGPEQLGNI+VPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLT V+EYQK ITRNPI
Sbjct:    4 TTTRKDLMIVNMGPHHPSMHGVLRLILTLDGEDVIDCEPILGYLHRGMEKIAENRTVIQYLPYVTRWDYLATMFTEAITVNGPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELVYDLFEAATGMRMMHNYFRIGGVAADLPYGWIDKCLDFCDYFLTAVSEYQKLITRNPI 198
The following BLAST results are available for this feature:
BLAST of DN135126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDHH_CITSI6.938e-11499.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CARPA9.704e-10894.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_GOSHI1.655e-10793.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_GOSBA1.655e-10793.00NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_CHLSC1.655e-10792.50NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_TOBAC1.830e-10693.37NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_SOLTU1.830e-10693.37NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_SOLLC1.830e-10693.37NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_NICSY1.830e-10693.37NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]
NDHH_EUCGG1.830e-10693.85NAD(P)H-quinone oxidoreductase subunit H, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionwca06f03 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca06f03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135126 ID=DN135126; Name=DN135126; organism=Citrus sinensis; type=EST; length=703bp
GGGGAAATTTGAAAAANNNNTTCGAATTATTTGATTTTGACTGTTGATGA
ACTTCTTGTTGTTTTCAACAATTCATGTAAGAATGAATCGAGGAAAAACC
TATGAGTATACTAGCTACAGAAAAAGAAAAAGAATTTATGATAGTCAATA
TGGGACCTCACCACCCGTCAATGCATGGGGTTCTTCGTCTCATCGTTACT
CTAGACGGTGAAGATGTTATTGACTGTGAACCAATATTGGGTCATTTACA
CAGAGGGATGGAAAAAATTGCGGAAAACCGAACAATTATACAATATCTGC
CTTATGTAACCCGTTGGGATTATTTAGCTACTATGTTCACAGAAGCAATA
ACTGTAAATGGACCAGAACAGTTGGGAAATATTCGCGTACCTAAAAGGGC
CAGCTATATCAGAGTAATTATGTTGGAGTTGAGTCGTATAGCTTCCCATC
TGTTATGGCTTGGCCCTTTTATGGCAGATATTGGTGCACAGACTCCTTTC
TTCTATATTTTCAGAGAAAGAGAATTAGTATATGATCTGTTCGAAGCTGC
CACCGGTATGAGAATGATGCATAATTATTTTCGTATCGGAGGAGTAGCAG
CTGATTTACCCTATGGTTGGATAGATAAATGTTTGGATTTCTGCGATTAT
TTTTTAACAGGGGTTGCTGAATATCAAAAACNNATTACGCGAAACCCCAT
TTT
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