DN134887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_DICDI (Putative mediator of RNA polymerase II transcription subunit 7 OS=Dictyostelium discoideum GN=med7 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27 Identity = 58/117 (49.57%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDDVLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKR 600 + Y+ FG Y+T D+LPSL+E G +QLYPKG +I+ EL+ LNR + + L+L + L+E P Y ++EDISL+F N HHLLNS RPHQAR TL+ I+ QI+++ Q+ E IK+ Sbjct: 150 VGANYVQFGQTYSTVDMLPSLDESGAKQLYPKG-DIEPISELKKLNRSILFNYLQLLETLIENPKNYQSKIEDISLLFINFHHLLNSYRPHQARETLLSIMNEQIKQKNQSNESIKK 265
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_AEDAE (Mediator of RNA polymerase II transcription subunit 7 OS=Aedes aegypti GN=MED7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.987e-23 Identity = 57/145 (39.31%), Postives = 91/145 (62.76%), Query Frame = 1 Query: 193 RLYKEYLQNPNSAXXXXXXIEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPS--QYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXEEAQ 618 +LY + N A I+GTY FG ++T+D ++ LE QG ++LYP+ + D +KEL+ LN L ++ L+L D+LV P Q A ++ED++L+F ++HHLLN RPHQAR TL ++ELQ R+R++ + + E+ + Sbjct: 21 KLYTDENVRNNRAPKPPAPIQGTYQMFGQQFSTEDNIIRPLEAQGFKRLYPQ--HFDRRKELKKLNHSLLVNFLDLIDLLVHNPDSPQRAEKIEDLNLLFVHIHHLLNEFRPHQARETLRVMMELQKRQRQETTQRFQNHLEKVR 163
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_ANOGA (Mediator of RNA polymerase II transcription subunit 7 OS=Anopheles gambiae GN=MED7 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20 Identity = 55/144 (38.19%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 196 LYKEYLQNPNSAXXXXXXIEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPS--QYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXEEAQ 618 LY + N A I+ Y FG ++ DD ++ LE QG ++LYP+ + D +KEL+ LN L ++ L+L D+LV P + A ++ED+SL+F ++HHLLN RPHQAR TL ++ELQ R+R + + + E+ + Sbjct: 22 LYTDENIRKNRAPKPPAPIQDAYTMFGSPFSNDDNIIRPLESQGFKRLYPQ--HFDRRKELKKLNHSLLVNFLDLIDLLVHYPDSPRRAEKIEDLSLLFVHIHHLLNEFRPHQARETLRVMMELQKRQRIETAQRFQNHLEKVR 163
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_COCIM (Mediator of RNA polymerase II transcription subunit 7 OS=Coccidioides immitis GN=MED7 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.639e-20 Identity = 51/129 (39.53%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 253 EGTYICFGGNYTTDDVLPSLEEQGVRQLYPK-------GPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXEEAQ 618 EG+Y FG + LPSLEEQG+ QLYP GP+ D L +++ L L+ LEL +L P QY ++EDI +F N HHLLN RPHQ+R +LI ++E Q+ + K+ + ++++ E + Sbjct: 73 EGSYSLFGEAQSLSTQLPSLEEQGIEQLYPSSLTNETAGPSPDHAYYLLKISKSLLLNFLELVGILSINPEQYEPKIEDIRNLFINAHHLLNLYRPHQSRESLITMMEEQLEQAKEEIREMEQTKERVE 201
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_PIG (Mediator of RNA polymerase II transcription subunit 7 OS=Sus scrofa GN=MED7 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXE 609 I+ +Y+ FG + DD ++ LE QG+ +L+P D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q R+R + E ++ E Sbjct: 38 IKDSYMMFGNQFQCDDLIIRPLESQGIERLHPM--QFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLE 158
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_MOUSE (Mediator of RNA polymerase II transcription subunit 7 OS=Mus musculus GN=Med7 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXE 609 I+ +Y+ FG + DD ++ LE QG+ +L+P D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q R+R + E ++ E Sbjct: 38 IKDSYMMFGNQFQCDDLIIRPLESQGIERLHPM--QFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLE 158
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_HUMAN (Mediator of RNA polymerase II transcription subunit 7 OS=Homo sapiens GN=MED7 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXE 609 I+ +Y+ FG + DD ++ LE QG+ +L+P D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q R+R + E ++ E Sbjct: 38 IKDSYMMFGNQFQCDDLIIRPLESQGIERLHPM--QFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLE 158
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_BOVIN (Mediator of RNA polymerase II transcription subunit 7 OS=Bos taurus GN=MED7 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.927e-19 Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXE 609 I+ +Y+ FG + DD ++ LE QG+ +L+P D KKELR LN + ++ L+L D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q R+R + E ++ E Sbjct: 38 IKDSYMMFGNQFQCDDLIIRPLESQGIERLHPM--QFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLE 158
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_DANRE (Mediator of RNA polymerase II transcription subunit 7 OS=Danio rerio GN=med7 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.949e-18 Identity = 46/123 (37.40%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 250 IEGTYICFGGNYTTDD-VLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXE 609 I +Y+ FG + DD ++ LE QG+ +L+P D K+EL+ LN + ++ L+L D+L++ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q R+R + E ++ E Sbjct: 38 IRDSYMMFGNQFQCDDLIIRPLESQGIERLHPM--QFDHKRELKKLNMSILVNFLDLLDILIKSPGSIKREEKLEDLKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLE 158
BLAST of DN134887 vs. ExPASy Swiss-Prot
Match: MED7_DROME (Mediator of RNA polymerase II transcription subunit 7 OS=Drosophila melanogaster GN=MED7 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.546e-18 Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 262 YICFGGNYTTDDVLPSLEEQGVRQLYPKGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIRRRKQAVEDIKRRXEEAQ 618 Y FG Y D+++ SLE Q +++L P + D +KEL+ LN L ++ L+L D L+ P R +++DISL+F N+HHLLN RPHQAR TL ++E+Q R+R + ++ E + Sbjct: 45 YSMFGIQYNNDEMIRSLESQNIKRLIPI--HFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNMHHLLNEFRPHQARETLRVMMEMQKRQRVETAARFQKHLERVR 163 The following BLAST results are available for this feature:
BLAST of DN134887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DN134887 ID=DN134887; Name=DN134887; organism=Citrus sinensis; type=EST; length=621bpback to top |