DN134886
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN134886 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.141e-47 Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 185 ASSSLFTPSTITVRKHQISPSSISFQGLRPLNTR-AKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFLRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV 598 ++S+L +P+T + +P+SISF GLRPL + + LPKL+T+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNF RENVAKQGLPEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIV Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIV 142
BLAST of DN134886 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.278e-37 Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 254 SFQGLRPL--NTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFLRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV 598 SF GLRPL N + L+ S+ R S +AEL+ LVISLSTGLSLFLGRFVFFNF REN+AKQ +PEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV 150
BLAST of DN134886 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.439e-31 Identity = 74/121 (61.16%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 236 ISPSSISFQGLRPLNTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFLRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV 598 +SP +++ L P + RA ++ A+R+ +A L +VISLSTGLSL +GRFVFFNF RENVAKQ +PEQNG THFEAGD RAKE+ +LKSNDPVGFN+VDVLAWGSIGHIV Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIV 125
BLAST of DN134886 vs. ExPASy Swiss-Prot
Match: PSAG_TORRU (Photosystem I reaction center subunit V, chloroplastic OS=Tortula ruralis GN=PSAG PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.895e-16 Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 359 NTPLVISLSTGLSLFLGRFVFFNFLRENVAKQGLPEQNGVTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIV 598 NT +IS ST L LGRFVF F R V++ GLPEQNGV + + S+LK+NDP GF +VDVLAWG++GH V Sbjct: 17 NTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAV 96
BLAST of DN134886 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 2 Query: 353 ELNTPLVISLSTGLSLFLGRFVFFNFLRENVAKQGLPEQ 469 ELN LVISLSTGLSLFLGRFVFFNF RENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39 The following BLAST results are available for this feature:
BLAST of DN134886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN134886 ID=DN134886; Name=DN134886; organism=Citrus sinensis; type=EST; length=600bpback to top |