DN134880

Overview
NameDN134880
Unique NameDN134880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length441
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9926 contig Csv1_Contig9926:1..440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN134880 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.124e-17
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 1 
Query:   70 MIYDVNSPLFRSFLSQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 210
            MIYDVNSPLFRSFLSQKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of DN134880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU2.124e-1785.11Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionwca02f09 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02f09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134880 ID=DN134880; Name=DN134880; organism=Citrus sinensis; type=EST; length=441bp
AAAACGAAAACGGAACTAGGGTTCCTTTTTCCGATACAGGAATCCTACGG
TGATAATTCATAATCAACAATGATCTACGACGTGAACTCTCCTCTCTTCC
GTTCCTTCCTCAGCCAGAAGGGCGGCGCTTCTGACAAGAGGAAAATGGAA
GAGCAAAGGCCAAAAGAACAAAGACCCAAAACAAATGAGAACAAGCCTGT
CATGACAGAGTGAGAGTTGCGTTTTGCTTGTAATGCTTCAGTGATGAGAT
AGAAGTAGTACGGTTCAGTGGTCACAGTCATCCAAATGTAACTGATTCTG
ATTTTCCTTGGTTTNNGGGTTTGTAGTGGTCTGTGTTTGGATTTGGATGT
TCNNNGTGGAACAAAAAATGTTTGGTAGTGCTATTATGCATTTAATATAT
TATTAAGGAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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