DN134868

Overview
NameDN134868
Unique NameDN134868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length282
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9926 contig Csv1_Contig9926:5..286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN134868 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.938e-17
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 2 
Query:   65 MIYDVNSPLFRSFLXQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 205
            MIYDVNSPLFRSFL QKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of DN134868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU6.938e-1782.98Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionwca02e05 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02e05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134868 ID=DN134868; Name=DN134868; organism=Citrus sinensis; type=EST; length=282bp
GAAAACGGAACTAGGGTTCCTTTTTCCGATACAGGAATCCTACGGTGATA
ATTCATAATCAACAATGATCTACGACGTGAACTCTCCTCTCTTCCGTTCC
TTCCTCAGNCAGAAGGGCGGCGCTTCTGACAAAAGGAAAATGGAAGAGCA
AAGGCCAAAAGAACAAAGACCCAAAACAAATGAGAACAAGCCTGTCATGA
CAGAGTGAGAGTTGCGTTTTGCTTGTAATGCTTCAGTGATGAGATAGAAG
TAGTACGGTTCAGTGGTCACAGTCATCCAATT
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