CX044101

Overview
NameCX044101
Unique NameCX044101
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGGPK 185
            G +DFSKILNDPELM AFSDPEVMAALQDVMKNPANLA+HQANPKVAP+IAKMM KF GP+
Sbjct:  381 GGMDFSKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQANPKVAPVIAKMMGKFAGPQ 441
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 179
            G    ++IL+DPE++AA  DPEVM A QDV +NPAN++++Q+NPKV  +I+K+ AKFGG
Sbjct:  309 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 179
            G    ++IL+DPE++AA  DPEVM A QDV +NPAN++++Q+NPKV  +I+K+ AKFGG
Sbjct:  309 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 179
            G    ++IL+DPE +AA  DPEVM A QDV +NPAN++++Q+NPKV  +I+K+ AKFGG
Sbjct:  309 GMPGLNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.477e-13
Identity = 32/59 (54.24%), Postives = 47/59 (79.66%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 179
            G    ++IL+DPE++AA  DPEVM A QDV +NP+N++++Q+NPKV  +I+K+ AKFGG
Sbjct:  311 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-12
Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFG 176
            G    ++IL+DPE++AA  DPEVMAA QDV +NPAN++++Q NPKV  +I K+ AKFG
Sbjct:  301 GMPGLNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKFG 358
[Close]
BLAST of CX044101 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.889e-12
Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 3 
Query:    3 GNVDFSKILNDPELMAAFSDPEVMAALQDVMKNPANLAQHQANPKVAPIIAKMMAKFGG 179
            G    ++IL+DPE++AA  DPEVM A QDV +NP+N++++Q NPKV  +I+K+ AKFGG
Sbjct:  308 GMPGLNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGG 366
The following BLAST results are available for this feature:
BLAST of CX044101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
F10AL_ARATH1.261e-2486.89FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_PONAB3.805e-1355.93Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN3.805e-1355.93Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A5_HUMAN6.491e-1355.93Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A1_MOUSE8.477e-1354.24Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A1_CHICK1.446e-1256.90Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A1_RAT1.889e-1254.24Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15D03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15D03-G5-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044101 ID=CX044101; Name=CX044101; organism=Citrus sinensis; type=EST; length=525bp
CTGGAAATGTTGATTTTAGCAAGATATTAAATGACCCTGAGTTGATGGCA
GCATTTAGCGATCCAGAAGTCATGGCTGCTCTTCAAGATGTAATGAAGAA
CCCTGCTAATCTCGCTCAGCATCAAGCAAATCCCAAAGTGGCTCCCATAA
TTGCTAAGATGATGGCCAAGTTTGGAGGACCCAAGTAGATTGCTTTCCGG
GCTGGCATCTTATTTTGTTGTTGGTGAATGGTAACCTTTGTGTGTCACAT
CTCATGAATCTTGTGCGGCTCTTACGATTTCTGGGTATGGTATGGATTAG
GAATGTTTGGCAGCTGCATCTACATATCTGCTGGGAATTTTTCTTTCTGG
GTGAAAGGATTGAGTTTATGTAGTGGTTTAAAATTTCGTCCTCAAATTCT
TGTCTTAGTTGCTGAACAAAGAATGTGCTTTCATAACTTGGGACTAGTTT
TTACTTGCAGAATTATTAAAGGAATGCCATAGCCTATAATTTCTGGTTTA
GAATTGTTTAAAAAAAAAAAAAAAA
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