CX044096

Overview
NameCX044096
Unique NameCX044096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX044096 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 66/221 (29.86%), Postives = 97/221 (43.89%), Query Frame = 3 
Query:   27 IESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAKGVGEYLGLQSSPGDKFPPL----AVELDTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 641
            I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE DT +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   61 ISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272
The following BLAST results are available for this feature:
BLAST of CX044096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEC2_CLALU5.107e-1129.86Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15C11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C11-E21-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044096 ID=CX044096; Name=CX044096; organism=Citrus sinensis; type=EST; length=836bp
ATAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAAGC
ATCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGACGGGT
TTTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCACCA
TCACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAGAT
GGCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAAAGGG
CGTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTTCCTC
CATTAGCCGTGGAGCTGGACACATGCCTGAACAAGAACCTGAATGATCCA
GATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATCCAGT
TAATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAGGTTC
GAATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGCGGCATAT
TCGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACCTGTCAGA
TATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACGGGGGACT
TTTTAGAAAGCCATGAGGTTATAAATTGGACCTTCAACTCGTTCCCAGTG
CCGCCTTCTCTCAAGGAGAAAAACCTGGTGATGCCAATATAATTCTAAAC
CGTCCTTGAAAAACCATGTCACATAAATTATAATCAATAATAATTAATAT
CACCAATAAAGTGACATGGCTCTTGCATTAAAATATTGAATAAAATGATA
GCAGCGACTAGGATTAATACTGTTTGCTTGCTGTCT
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