CX044090

Overview
NameCX044090
Unique NameCX044090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: CP74A_ARATH (Allene oxide synthase, chloroplastic OS=Arabidopsis thaliana GN=CYP74A PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.690e-47
Identity = 95/216 (43.98%), Postives = 136/216 (62.96%), Query Frame = -3
Query:  257 DEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKE--KCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 874
            D+ G+++EEA HNLLF   FN +GG  I  P ++  I      +  +L  E++   K     LT  +++ +EL +SVVYE LR  PPV  Q+ RA+KD  + S+D+ + +K GE+L GYQPL  RD K+FD A+ F  ERF+GE+G +LL ++ WSNGP+T TP   NKQCAGKD+V LVA L V  +F+RY+S          G+S + +++ KA
Sbjct:  301 DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA 516          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: CP74_LINUS (Allene oxide synthase, chloroplastic OS=Linum usitatissimum GN=CYP74A PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.422e-47
Identity = 89/195 (45.64%), Postives = 134/195 (68.72%), Query Frame = -3
Query:  299 DEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 874
            ++ G++++EA HN+LF + FN++GGF I  P L+  I      L  KL  E++   +  G   +T  +++ + L++SVVYETLR+ PPV LQ+ +A+KDF L S+++ Y +K+GE+L GYQP   +D K+FD  E F A+RF+GE G +L+ Y+ WSNGP+T TP+  NKQCAGKD+V + A L V  +F+RY+S
Sbjct:  319 EQSGISRDEACHNILFAVCFNSWGGFKILFPSLMKWIGRAGLELHTKLAQEIRSAIQSTGGGKVTMAAMEQMPLMKSVVYETLRIEPPVALQYGKAKKDFILESHEAAYQVKEGEMLFGYQPFATKDPKIFDRPEEFVADRFVGE-GVKLMEYVMWSNGPETETPSVANKQCAGKDFVVMAARLFVVELFKRYDS 512          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: C74A4_ORYSJ (Allene oxide synthase 4 OS=Oryza sativa subsp. japonica GN=CYP74A4 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.422e-47
Identity = 95/199 (47.74%), Postives = 134/199 (67.34%), Query Frame = -3
Query:  287 GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKC--GTSALTFESV-KSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGS---ELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 865
            G+ ++E +HNL+F+  FNA+GGF IF+P ++  +A     L AKL SEV+     G   +T  +V K + LV+SVV+E LR+NPPV  Q+ RAR+D  + S+D+ Y+++KGELL GYQPL  RD KVFD A  F  +RF+   GS    LL ++ WSNGP+TGTP++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  283 GIPRDELLHNLVFVAVFNAYGGFKIFLPHIVKWLARAGPELHAKLASEVRAAAPAGGGEITISAVEKEMPLVKSVVWEALRMNPPVEFQYGRARRDMVVESHDAAYEVRKGELLFGYQPLATRDEKVFDRAGEFVPDRFVSGAGSAARPLLEHVVWSNGPETGTPSEGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAAD 481          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: C74A2_PARAR (Allene oxide synthase OS=Parthenium argentatum GN=CYP74A2 PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 6.011e-45
Identity = 85/200 (42.50%), Postives = 130/200 (65.00%), Query Frame = -3
Query:  299 VQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVK---EKCGTSALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYES 889
            V    ++ G+ K+EA+HN+LF + FN FGG  I  P  +  I      L  +L  E++   +  G   +T E+++ + L +SVVYE+LR+ PPVP Q+ +A+ +F + S+D+ +++KKGE+L GYQP   +D KVFD  E +  +RF+G+ G  LL Y++WSNGP+T +P   NKQCAGKD+V L+  L V  +F+RY+S
Sbjct:  251 VMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD-GEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDS 449          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: C74A3_ORYSJ (Allene oxide synthase 3 OS=Oryza sativa subsp. japonica GN=CYP74A3 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.679e-44
Identity = 90/199 (45.23%), Postives = 131/199 (65.83%), Query Frame = -3
Query:  287 GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTS---ALTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFM--GEKGSE-LLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESITGN 865
            G+ ++E + NL+F+  FNAFGGF IF+P ++  +A     L AKL +EV+    T     +T  +V+ + LV+SVV+E LR+NPPV  Q+  AR+D  + S+D+ Y+++KGE+L GYQPL  RD KVFD A  F A+RF+  G  G   LL ++ WSNGP+T  P++ NKQC GKD V  V  L+VA +F+RY++   +
Sbjct:  281 GIPRDELLDNLVFVAIFNAFGGFKIFLPHIVKWLARAGPELHAKLATEVRATVPTGEDDGITLAAVERMPLVKSVVWEALRMNPPVEFQYGHARRDMVVESHDAAYEVRKGEMLFGYQPLATRDEKVFDRAGEFVADRFVAGGAAGDRPLLEHVVWSNGPETRAPSEGNKQCPGKDMVVAVGRLMVAELFRRYDTFAAD 479          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: C74A2_ORYSJ (Allene oxide synthase 2 OS=Oryza sativa subsp. japonica GN=CYP74A2 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 8.679e-44
Identity = 90/209 (43.06%), Postives = 136/209 (65.07%), Query Frame = -3
Query:  257 GLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTSA--LTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFD-DAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESIT---GNSSSITAVEKA 865
            GL++EEA HNLLF   FN++GGF + +P++++ +A     L  +L +E++     +   +T  +++ +EL +SVV+E LRL+PPV  Q+ RA+ D ++ S+D+ + IKKGE+L GYQP   RD +VF   A  F  +RF+GE+G +LL Y+YWSNG +T  P+  NKQC GK+ V LV  L++  +F RY++ T   G    IT V KA
Sbjct:  261 GLSREEACHNLLFATVFNSYGGFKLLLPQILSRVAQAGEKLHERLAAEIRSAVADAGGNVTLAALEKMELTRSVVWEALRLDPPVRFQYGRAKADLEIESHDASFAIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFVGEEGRKLLQYVYWSNGRETENPSVDNKQCPGKNLVVLVGRLLLVELFLRYDTFTAEAGKKVVITGVTKA 469          
BLAST of CX044090 vs. ExPASy Swiss-Prot
Match: C74A1_ORYSJ (Allene oxide synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CYP74A1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.679e-44
Identity = 88/222 (39.64%), Postives = 141/222 (63.51%), Query Frame = -3
Query:  257 VVQRGQDEFGLTKEEAIHNLLFILGFNAFGGFSIFVPKLINAIASDTTGLQAKLRSEVKEKCGTSA--LTFESVKSLELVQSVVYETLRLNPPVPLQFARARKDFQLSSYDSVYDIKKGELLCGYQPLVMRDSKVFDDAESFKAERFMGEKGSELLSYLYWSNGPQTGTPNDMNKQCAGKDYVTLVACLIVAYVFQRYESI--------TGNSSSITAVEKA 892
            VV  G+   G+ +EEA+HN+LF L FN+FGG  I  P L+  +      +  +L +EV+     +   +T +++  + LV+S VYE LR+ PPV +Q+ RA++D  + S+D  Y++++GE+L GYQP+  +D +VF   E +  +RF+GE G+ LL ++ WSNGP+T  P   +KQCAGKD+V LVA L++  +F RY+S          G+S ++T+++KA
Sbjct:  290 VVDEGE-RLGIAREEAVHNILFALCFNSFGGMKILFPTLVKWLGRAGARVHGRLATEVRGAVRDNGGEVTMKALAEMPLVKSAVYEALRIEPPVAMQYGRAKRDMVVESHDYGYEVREGEMLFGYQPMATKDPRVFARPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHDKQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTSTLGSSVTVTSLKKA 510          
The following BLAST results are available for this feature:
BLAST of CX044090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CP74A_ARATH1.690e-4743.98Allene oxide synthase, chloroplastic OS=Arabidopsi... [more]
CP74_LINUS6.422e-4745.64Allene oxide synthase, chloroplastic OS=Linum usit... [more]
C74A4_ORYSJ6.422e-4747.74Allene oxide synthase 4 OS=Oryza sativa subsp. jap... [more]
C74A2_PARAR6.011e-4542.50Allene oxide synthase OS=Parthenium argentatum GN=... [more]
C74A3_ORYSJ8.679e-4445.23Allene oxide synthase 3 OS=Oryza sativa subsp. jap... [more]
C74A2_ORYSJ8.679e-4443.06Allene oxide synthase 2 OS=Oryza sativa subsp. jap... [more]
C74A1_ORYSJ8.679e-4439.64Allene oxide synthase 1, chloroplastic OS=Oryza sa... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15C08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C08-E15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044090 ID=CX044090; Name=CX044090; organism=Citrus sinensis; type=EST; length=897bp
TTTTTTTTTTTTTTTTTAAGGGGAAAGATGGAGAGAGCCGCGTCGCACCA
TAAATATCATCCACGAGACTTTTTTATTCATTCACCGGTTCGCTACTACT
ACATCCAAGGGAACCGGTGGGACCCATCTCTACATAACTTTCTCTATTAA
CAACCAAACCAGACAAACGTTACAACTCGACGTTACGTTCACGATCCATC
ACCGTCATACGACCCCATTCACGTGATGATGCTCACGTTCAAAATCACCA
TCACTTGGCCTTTTCAACGGCCGTGATCGAAGATGAGTTCCCAGTAATAG
ACTCGTACCTTTGGAACACATAAGCCACGATCAAACAAGCAACGAGAGTC
ACGTAATCCTTTCCGGCACACTGCTTGTTCATGTCATTGGGAGTCCCCGT
CTGTGGCCCATTTGACCAATACAAGTAACTCAACAACTCGCTCCCCTTTT
CGCCCATAAACCTCTCAGCCTTAAAACTCTCAGCATCGTCAAACACCTTC
GAATCCCTCATGACCAAAGGCTGATACCCGCAAAGCAACTCACCTTTCTT
GATATCGTACACCGAGTCGTACGAGCTCAGTTGGAAGTCCTTCCTTGCCC
TTGCAAACTGGAGAGGAACCGGTGGGTTAAGTCTCAGAGTTTCGTAAACC
ACAGACTGAACCAACTCTAGACTCTTGACTGACTCAAAAGTCAAGGCGGA
TGTCCCACATTTCTCTTTCACTTCACTTCTTAACTTTGCCTGCAACCCAG
TTGTGTCACTAGCAATTGCATTAATCAGCTTTGGCACAAAAATAGAGAAC
CCACCGAAAGCATTAAACCCTAGAATGAACAGCAAGTTGTGAATGGCCTC
TTCTTTTGTTAGCCCAAACTCGTCCTGCCCCCGCTGCACAACTTCTT
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