CX044088
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: U172_ARATH (UPF0172 protein At5g55940 OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.970e-79 Identity = 144/197 (73.10%), Postives = 169/197 (85.79%), Query Frame = -3 Query: 252 YELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXDISKDWLNPDLF 842 YE+SQNAYIKLVL + +HKTAAVNGVL+GR+SP++D VVEI+DSVPLFHS+L LLP LEISLIMIEEHY AQGL IVGYFHANERFDD+EL +AKNIG+HI RYFPQ +LLL+NKKLEAL KGK+RSPVMQL ++DASKNW++VG+DGG +LL KEP+AN VLSDYISSEKW+ D++KDWLNP LF Sbjct: 11 YEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNNKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKDVTDVDDHLDDVTKDWLNPGLF 207
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: F158A_RAT (UPF0172 protein FAM158A OS=Rattus norvegicus GN=Fam158a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = -3 Query: 471 ELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 839 E+S AY K+ L A ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP +++LDNKKL P+ Sbjct: 5 EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTWPR 126
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: F158A_MOUSE (UPF0172 protein FAM158A OS=Mus musculus GN=Fam158a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.644e-18 Identity = 48/123 (39.02%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 471 ELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 839 E+S AY K+ L A ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP+ +++LDNKKL P+ Sbjct: 5 EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTRPR 126
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: F158A_HUMAN (UPF0172 protein FAM158A OS=Homo sapiens GN=FAM158A PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.658e-17 Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = -3 Query: 471 ELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 839 E+S AY+K+ L A ++ AAVNG+ L +P++ + + D VPLFHSHL L LE++L ++ + GL + GY+HAN +D +A I I +FP +++LDN+KL P+ Sbjct: 5 EISALAYVKMCLHAARYPHAAVNGLFLAP-APRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPR 126
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: U172_DROME (UPF0172 protein CG3501 OS=Drosophila melanogaster GN=CG3501 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.841e-15 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = -3 Query: 492 YELSQNAYIKLVLQARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSI-AKNIGNHICRYFPQCAVLLLDNK 842 Y++S+ AY KL+ A K+ AVNG+LL + + V EI D++PLFH L + P E++L++I+ H +GL I GY+ A E F D ++D A I + I F +++DNK Sbjct: 4 YKVSERAYAKLIFHAAKYPHQAVNGLLLAEKTSKGSQV-EIVDAIPLFHQCLYVTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACFVVVDNK 120
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: CX4NB_MOUSE (Neighbor of COX4 OS=Mus musculus GN=Cox4nb PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14 Identity = 55/204 (26.96%), Postives = 93/204 (45.59%), Query Frame = -3 Query: 249 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQND------AVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXDISKDWLNPDLFK 839 +L+ AY K+VL K+ AVNG+L+ R P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y + ++ W+ D P A + + + S ++ DI DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGSHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFGDAALIMVDNAKFTM----DCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRSDWTNPEINK 201
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: CX4NB_RAT (Neighbor of COX4 OS=Rattus norvegicus GN=Cox4nb PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.699e-14 Identity = 55/204 (26.96%), Postives = 92/204 (45.10%), Query Frame = -3 Query: 249 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXDISKDWLNPDLFK 839 +L+ AY K+VL K+ AVNG+L+ R P+ + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y + ++ W+ D P A + + + S ++ DI DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIMVDNAKFTM----DCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRSDWTNPEINK 201
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: CX4NB_HUMAN (Neighbor of COX4 OS=Homo sapiens GN=COX4NB PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.434e-14 Identity = 54/207 (26.09%), Postives = 92/207 (44.44%), Query Frame = -3 Query: 249 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXDISKDWLNPDLFK 839 +L+ AY K+VL K+ AVNG+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y ++ W+ D P A + + + S ++ DI DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTKFTM----DCVAPTIHVYEHHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINK 204
BLAST of CX044088 vs. ExPASy Swiss-Prot
Match: CX4NB_BOVIN (Neighbor of COX4 OS=Bos taurus GN=COX4NB PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.454e-13 Identity = 54/207 (26.09%), Postives = 91/207 (43.96%), Query Frame = -3 Query: 249 ELSQNAYIKLVLQARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANAVLSDYISSEKWQXXXXXXXXXXDISKDWLNPDLFK 839 +L+ AY K+VL K+ AV+G+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K P + +Y +K W+ D P A + + + S ++ DI DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVDGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTKFTM----DCVVPTIHVYEHHENK-WRC--RDPHYDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINK 204 The following BLAST results are available for this feature:
BLAST of CX044088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX044088 ID=CX044088; Name=CX044088; organism=Citrus sinensis; type=EST; length=844bpback to top |