CX044082

Overview
NameCX044082
Unique NameCX044082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044082 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.495e-26
Identity = 73/206 (35.44%), Postives = 110/206 (53.40%), Query Frame = -3
Query:  252 VHLGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 863
            +  GT+++ L H+A L  GQ               V +   V GA +I  +R  EK+  ++ +G    +D + E++   VKE        G +V+ + VGG + K+ LK + W   I+ +GFASGEIP IPANI LVKN +  GLYWG++  H P +L +S+ + L +   G L   +IS ++   + N AF  I  RK  GKV+I
Sbjct:  160 ISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIGASR-KEKLVIVQEIGATATIDYTRENIKDKVKELTDGH---GANVIMEAVGGDVFKQCLKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVI 361          
BLAST of CX044082 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.427e-21
Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = -3
Query:  249 VHLGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 863
            V  GT+ +A+ HRA++  G+               + +   V  A +IA A   EK K     G    V+ S  S+  +VK+ + +    GV+V  D VGG +  +SL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   L +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  146 VSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFCAKVIAAAGSDEKCKLAMQRGAQSGVNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLS 348          
BLAST of CX044082 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20
Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = -3
Query:  249 VHLGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 863
            V  GT+ +A+ HRA++  G+               + +   V  A +IA     EK K     G    V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  146 VSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFSVNYSQGSLRDAVKKLAGSG---GVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKINDAFLHVMQRKSTGKVLLS 348          
BLAST of CX044082 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20
Identity = 66/206 (32.04%), Postives = 100/206 (48.54%), Query Frame = -3
Query:  249 VHLGTSHVALVHRAQLSSGQXXXXXXXXXXXXXXXVQIG-KVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 863
            V  GT+  AL HRA    G+               + +   +  A +IA A   EK +     G    V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I  +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N AF  +  RK  GKV+++
Sbjct:  145 VSYGTAIFALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSSVNYSRGSLKEAVGKLVGSG---GVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIASVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVNDAFLHVTQRKSTGKVLLS 347          
The following BLAST results are available for this feature:
BLAST of CX044082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
QORL2_NEMVE4.495e-2635.44Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_RAT7.427e-2132.04Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_MOUSE4.814e-2031.55Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
QORL2_BOVIN4.814e-2032.04Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15C03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C03-E5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044082 ID=CX044082; Name=CX044082; organism=Citrus sinensis; type=EST; length=865bp
TTTTTACGGTACGTATTTCGCATTCATTGTTATCCAAATTTTGACAACCT
TAATTGCCAGGGACTTGCATTCTCATGCTTCACAACAAAGTCATAGATTT
TCTCTCATATAAGAGCAACTAAATGTGCCATGTATTAATTAAGGCTAATT
TTGATGATCAAGAGCCGCAGAAACATTCTCCATTGCATACCAGCCCAGTA
ATGATGATCAACTTAAAGCCTAGGCCTGATACTTTTCATGTCATCAAAAG
CAATCATCACCTTTCCAATTACTTTCCTATCTTCAATGGCAGAGAAGGCA
AGGTTGGCCTCTGATGGACTGTAAGTATGAGAAATATGGATGGTAATCAA
GCCCTTTGCAGCCCATAAGAGTAACTCCCTAAGAGAATCTTCAAGCACAT
GAGGTCGATGTATTTTATAGCTACCCCAGTAAAGTCCGTGTACTGTCCAG
TTCTTAACAAGAGCAATATTAGCAGGGATTACTGGAATCTCCCCACTTGC
AAAGCCAATGACTAAGATTTGAGCACCCCAGTTCAAAAGCTTCAAGGATT
CTTTAGTAAGCTTGCCTCCAACAGGATCATACAGAACATCAACCCCTTTG
AGTTTCCTTGCCTTGAGGAACTCTTTGACACTCGGAATGACACTCTCATT
GCTCAAGTCAACTACATGATCGACGCCCAATGACTTCAAAAATTTTATCT
TTTCAGCACCCCTAGCAACGGCAATGATAGTGGCTCCGCAAACCTTGCCA
ATTTGAACAGCGGCAACACCAACACCTCCAGCAGCACCAAGAACAAGCAA
GACCTGACCGGAGGACAATTGGGCCCGATGAACAAGAGCAACATGTGAGG
TTCCCAAATGCACAG
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