CX044081

Overview
NameCX044081
Unique NameCX044081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_DANRE (Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.076e-23
Identity = 60/153 (39.22%), Postives = 90/153 (58.82%), Query Frame = -2
Query:  409 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH--PSRWKLWLVV-VGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 858
            VFH+RD  LTEK+D   A A++ ++  L  +R   +R  A   MV   LI   T+H+ YL F   D+G NM    ++G+  LL W  W  + R   P  W+  +VV +  GLA LL++ DFPP    +DAHA++H + +P+ +L++SF+ DDS
Sbjct:  151 VFHTRDTYLTEKMDYFCASAVILYSIYLCCVRTLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYGYNMAANASIGIINLLWWLCWCWLNRRILPYWWRCGMVVLLLHGLA-LLELLDFPPLFWVLDAHAVWHLSTVPVHFLFYSFLIDDS 302          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_XENLA (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.488e-21
Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = -2
Query:  409 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--HPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 858
            +FH+RD  LTEK+D   A +++  +  L  +R F ++  +      A L+     HI YL   + D+  NM    + G+  L+ W  W    R   P  WK  LVVV      LL++ DFPP    +DAHAL+H + IPL +L++SF+RDDS
Sbjct:  150 IFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANAFGAFLVLLFACHISYLTLGRFDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQPYLWKCVLVVVLLQSLALLELLDFPPVMWILDAHALWHFSTIPLHFLFYSFLRDDS 301          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_XENTR (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.653e-21
Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = -2
Query:  409 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTR--HPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 858
            +FH+RD  LTEK+D   A +++  +  L  +R F ++  +      A L+     H+ YL   + D+  NM      GV  L+ W  W    R   P  WK  LVV+      LL++ DFPP    +DAHAL+H + +PL +L++SF++DDS
Sbjct:  150 IFHTRDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANGFGAFLVLLFACHVSYLTLGRFDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQPYLWKCVLVVISLQSLALLELLDFPPVMWILDAHALWHFSTVPLHFLFYSFLKDDS 301          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_MOUSE (Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = -2
Query:  409 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRH---PSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 858
            VFH+RD +LTEK+D   A A++  +  L  +R   ++  +      A L+  +T HI YL+    D+G NM   +A+G+  L  W +W    R     +R  + +VV+ +GL+ LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS
Sbjct:  155 VFHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPSVASAFGALLLLLLTGHISYLSLVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPHTRRCMVVVVLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_HUMAN (Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 55/167 (32.93%), Postives = 91/167 (54.49%), Query Frame = -2
Query:  364 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK*NF 858
            VFH+RD +LTEK+D   A  ++  +  L  +R   ++  A      A L+  +T H+ YL+  + D+G N+   +A+G+  ++ W  W      R P   K  +VV+      LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS +    LLK+ +  F
Sbjct:  155 VFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDSLY----LLKESEDKF 317          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_BOVIN (Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = -2
Query:  409 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGV---AQLLIWAIWAGVTRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDS 858
            VFH+RD +LTEK+D   A  ++  +  L  +R   ++  A      A L+  +T H+ YL+    D+G NM   +A+G+   A  L W +W     H  +  + +V++ +GL+ LL++ DFPP    +DAHA++H + IP+  L++SF+ DDS
Sbjct:  155 VFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAMASAFRALLLLLLTAHVSYLSLIHFDYGYNMAANVAIGLLNAAWWLAWCLWNQRLPHVHKC-VAVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDS 305          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PER1_SCHPO (Protein PER1 homolog OS=Schizosaccharomyces pombe GN=SPAC823.07 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.904e-17
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = -2
Query:  421 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVM----VAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGVTRHPSR-WKLW--LVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 858
            VFH RD  +TEKLD  SA A + F     ++    +       +    +    IA    H+ YL+FY  D+G NMK  +A+G+ Q ++W  ++   R+    W  W   +V    LA  L+++DF P    +DAHAL+H + +P+T+  + F+
Sbjct:  157 VFHIRDTPITEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIGVIFIAAFIAHVSYLSFYSFDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWTRWPAYIVTSLMLATSLELFDFSPIANLIDAHALWHLSTVPITHYLYGFV 309          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_CRIGR (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 55/168 (32.74%), Postives = 93/168 (55.36%), Query Frame = -2
Query:  364 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWA--GVTRHP-SRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFIRDDSEFRTTALLKKPK*NF 858
            VFH+RD +LTEK+D   A A++  +  L  +R   ++  +      A L+  +  H  YL+  + D+  NM   +A+G+  L  W  W      R P +R  + +V++ +GL+ LL++ DFPP    +DAHA++H + IP+  L++ F+ DDS +    LLK+ +  F
Sbjct:  155 VFHTRDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQHPSVARAFGATLLLMLLLHTSYLSLVRFDYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPHTRKCVAVVLLLQGLS-LLELLDFPPLFWVLDAHAIWHISTIPVHVLFFRFLEDDSLY----LLKESEAKF 317          
BLAST of CX044081 vs. ExPASy Swiss-Prot
Match: PGAP3_DROME (Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.033e-14
Identity = 44/148 (29.73%), Postives = 77/148 (52.03%), Query Frame = -2
Query:  421 VFHSRDVELTEKLDCSSAVALLGFNFILAILRAFSVRDEAARVMVAAPLIAFVTTHILYLNFYKLDHGLNMKVCLAMGVAQLLIWAIWAGV--TRHPSRWKLWLVVVGEGLAMLLQIYDFPPYRGFVDAHALYHAANIPLTYLWWSFI 858
            +FH+RD  LTE LD + A +++  +  + ++R         R ++    +++   +  YL+  + ++  NM V +A GV   + W +W     TR P   ++    +   LAM L++ DFPP    +DAHAL+H A IPL  L++  +
Sbjct:  162 IFHTRDFPLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRGVITLAFLSYYINYFAYLSVGRFNYAFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILRFYILMALAMSLELLDFPPILWILDAHALWHLATIPLASLYYECV 309          
The following BLAST results are available for this feature:
BLAST of CX044081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PGAP3_DANRE2.076e-2339.22Post-GPI attachment to proteins factor 3 OS=Danio ... [more]
PGAP3_XENLA1.488e-2136.84Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PGAP3_XENTR5.653e-2134.87Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PGAP3_MOUSE2.375e-1935.29Post-GPI attachment to proteins factor 3 OS=Mus mu... [more]
PGAP3_HUMAN1.540e-1832.93Post-GPI attachment to proteins factor 3 OS=Homo s... [more]
PGAP3_BOVIN2.626e-1834.64Post-GPI attachment to proteins factor 3 OS=Bos ta... [more]
PER1_SCHPO2.904e-1732.03Protein PER1 homolog OS=Schizosaccharomyces pombe ... [more]
PGAP3_CRIGR3.792e-1732.74Post-GPI attachment to proteins factor 3 OS=Cricet... [more]
PGAP3_DROME1.033e-1429.73Post-GPI attachment to proteins factor 3 OS=Drosop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15C02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C02-E3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044081 ID=CX044081; Name=CX044081; organism=Citrus sinensis; type=EST; length=859bp
TTTTTTTTTTTTTTTTTAGAAAACAGCGAACCACCGTGCTAATGGAAAAT
AATAATGAATTTACAGCAAAGTTAAGATACTTTAATTTCGTGTGACTTCC
GCCTACCGAACTAACTAATTGGGTAGGGGAAAAATGCCAACATGAAGATC
TAAGAATTTGATTTCTGTTACAAGAACATATCTCATAGACTCCAAGAAAA
ATGACGTGCCATGAAAAACAAAAATTTTGAAACAACAGGACCTGCCAGGT
TGAGCAGTCTGGAAAATATAGAAATCAGGGGATAAGAGAATACATTCTGA
TGTTGAATAGCTGGCGAGCATGGTACAATCGGCTGGAAATGATTGGTGCA
TGTATTGATTGAAGAAATTTCACTTTGGTTTTTTCAGGAGAGCAGTTGTC
CTGAACTCACTGTCATCTCTGATAAAGCTCCACCAAAGATATGTTAGAGG
AATATTAGCAGCATGATATAAAGCATGAGCATCCACAAAACCCCGGTAGG
GTGGGAAATCATATATCTGCAAAAGCATGGCTAAGCCTTCTCCAACAACC
ACCAACCACAGCTTCCAGCGTGATGGGTGGCGAGTAACACCAGCCCAAAT
TGCCCAAATGAGAAGTTGAGCTACGCCCATTGCTAGACATACTTTCATGT
TTAGGCCATGATCAAGTTTATAGAAATTCAGGTACAAGATGTGAGTTGTC
ACAAATGCAATCAATGGAGCAGCAACCATGACCCTAGCAGCCTCGTCTCT
GACGCTGAAAGCTCGCAGAATTGCTAGAATGAAATTAAAACCAAGTAATG
CTACAGCAGAAGAACAATCGAGCTTCTCTGTCAATTCAACATCTCGACTG
TGGAAAACA
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