CX044067
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.284e-77 Identity = 153/188 (81.38%), Postives = 156/188 (82.98%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLADPLPV 566 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RLKTK+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE VLNGSSG PESL + L + Sbjct: 735 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLKTKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGKVIVLNGSSGTPESLPEALSI 922
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.237e-75 Identity = 151/189 (79.89%), Postives = 155/189 (82.01%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLA-DPLPV 566 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK K+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE TVLNGSSG P A +P+PV Sbjct: 735 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPIPV 923
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPAA_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplastic OS=Solanum lycopersicum GN=CD4A PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.200e-73 Identity = 149/189 (78.84%), Postives = 154/189 (81.48%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAPESLADPLPVV 569 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF RLK K+IELQ GYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKE TVLNG+SGAP A P P++ Sbjct: 738 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSA-PEPIL 925
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.974e-70 Identity = 144/192 (75.00%), Postives = 153/192 (79.69%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNGSSGAP----ESLADPLPV 566 GRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F+RLK K++ELQ GYNPSYGARPLRRAIMRLLEDSM EKMLAREIKE TVLNG SG P E D LPV Sbjct: 683 GRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELFERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDSVIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_PORYE (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra yezoensis GN=clpC PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.341e-54 Identity = 109/174 (62.64%), Postives = 131/174 (75.29%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEXXXXXXXXXXXXXXTVLNG 524 GRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L GYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK TVL G Sbjct: 641 GRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKQRLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIKAGDSAVVDVTNEGEVTVLLG 814
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_GUITH (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Guillardia theta GN=clpC PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.341e-54 Identity = 109/155 (70.32%), Postives = 125/155 (80.65%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTDSKGRTVDFKNTLLI+TSNVGS VIEKGG +GFDL D+ +S Y RIK+LV EELKQYFRPEFLNRLDE+IVFRQLTK EV EIA+IMLKEVF R+ K I+L+ GYNP YGARPLRRA+MRLLED+++E+ LA +IKE Sbjct: 638 GRLTDSKGRTVDFKNTLLILTSNVGSKVIEKGGGGLGFDLSEDQTESQYGRIKALVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVGEIAEIMLKEVFTRISEKGIQLEVTARFKTHLINEGYNPIYGARPLRRAVMRLLEDTLSEEFLAEKIKE 792
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_PORPU (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Porphyra purpurea GN=clpC PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.751e-54 Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 464 GRLTD+KGRT+DFKNTLLIMTSN+GS VIEKGG +GF+L D+ +S Y R++SLV EELKQYFRPEFLNRLDE+IVFRQLTK EV+EIA++ML EVF R+K +DI+L GYNPSYGARPLRRA+MRLLEDS+AE++L+ +IK Sbjct: 641 GRLTDAKGRTIDFKNTLLIMTSNIGSKVIEKGGGSLGFELSEDQTESQYTRVRSLVNEELKQYFRPEFLNRLDEIIVFRQLTKDEVREIAELMLNEVFARIKQQDIQLNVTERFKERLVEEGYNPSYGARPLRRAVMRLLEDSLAEEVLSGKIK 794
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.038e-51 Identity = 100/155 (64.52%), Postives = 128/155 (82.58%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTDSKGRT+DFKNTLLIMTSN+GS VIEK G +GF+L+ + ++ Y+R+++LV EELKQYFRPEFLNR+DE+IVFRQLTK EV++IA IML+E+F+R+K + I LQ GYNPSYGARPLRRA++RLLEDS+AE++L+ +IKE Sbjct: 671 GRLTDSKGRTIDFKNTLLIMTSNIGSKVIEKKGGGLGFELEENIEELQYSRMRNLVNEELKQYFRPEFLNRVDEIIVFRQLTKDEVRDIAHIMLREIFERVKQQGISLQVTERFKNLLIEEGYNPSYGARPLRRALVRLLEDSLAEEVLSGKIKE 825
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: ERD1_ARATH (ERD1 protein, chloroplastic OS=Arabidopsis thaliana GN=ERD1 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.174e-36 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGR-RIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 464 G LTDS+GR V FKN L+IMTSNVGS I KG IGF LD DE+ +SY +K+LV EELK YFRPE LNR+DE+++FRQL K ++ EI ++ML+++ RL + L+ GY+P+YGARPLRR + ++ED ++E LA K Sbjct: 756 GHLTDSQGRRVSFKNALIIMTSNVGSLAIAKGRHGSIGFILDDDEEAASYTGMKALVVEELKNYFRPELLNRIDEIVIFRQLEKAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICKQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFK 910
BLAST of CX044067 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.013e-34 Identity = 76/155 (49.03%), Postives = 109/155 (70.32%), Query Frame = 3 Query: 3 GRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKTKDIELQXXXXXXXXXXXXGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKE 467 GRLTDSKGR VDF+NT++IMTSNVG+S +++ + +GF LD +EKD Y +KS V EELK+ FRPEFLNR+DE IVF L K +K+I +M++++ RLK +D+ L G++P YGARPLRR+I + +ED ++E++L I++ Sbjct: 640 GRLTDSKGRVVDFRNTVIIMTSNVGASELKRN-KYVGFALDNEEKD--YKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKEHMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEK 791 The following BLAST results are available for this feature:
BLAST of CX044067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044067 ID=CX044067; Name=CX044067; organism=Citrus sinensis; type=EST; length=863bpback to top |