CX044066

Overview
NameCX044066
Unique NameCX044066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX044066 vs. ExPASy Swiss-Prot
Match: Y4634_ARATH (Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 52/125 (41.60%), Postives = 64/125 (51.20%), Query Frame = -1 
Query:  228 KREHPGHMSXXXXXXXXXXXXXE-----MDEGSDQDAYAGKRVNGKSQ---KQSRAKPNLKMPPAKVTQRKSSTPSPATLNVVRKQQWTPK-----XXXXXXXXXXXXXEDRDNVEDGFRYGQNN 563
            KREHPGH+                    +D+GSDQD Y     NGK Q   +QSRAKPN++ PPAKV  +K ST SPA   + +K  W  K                  EDRDNVEDG+R+G+NN
Sbjct:  252 KREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKV-GKKGSTSSPAKARIAKK-PWQAKETFEEVEREEEEDSEETEEDRDNVEDGWRFGENN 374
The following BLAST results are available for this feature:
BLAST of CX044066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4634_ARATH1.069e-1441.60Uncharacterized zinc finger protein At4g06634 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_15B05_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15B05-C9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044066 ID=CX044066; Name=CX044066; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTAGCGAATCACCAATATTTTAAAATTAAAAATTTT
TAAATTTATTTATATGCTGCAATGAGAGAAAAAAAGATGCTGAAAGCAAG
CAGATAAAAGATGACAGAGAACCTGTTTGTAAGGGTTAGATACATACAAG
GTGCCCTTACCAGAAGGGTGAAGGAAACATTTTTATATGCTTCAGTCTTC
GTACTCAGTCTCCTCATCATCATCTTCATTATTTTGCCCGTACCTAAATC
CATCCTCAACATTGTCACGATCTTCCTCAGTTTCTTCACTATCTTCTTCC
TCGTAAACTTCTTCTTTAGGAGTCCATTGTTGCTTTCTCACTACATTCAA
GGTGGCAGGAGATGGAGTTGAGCTTTTGCGTTGCGTTACTTTTGCAGGAG
GCATCTTCAAGTTTGGCTTCGCCCGGCTTTGTTTTTGACTTTTGCCATTA
ACACGTTTTCCAGCATAGGCATCTTGGTCACTGCCTTCATCCATCTCATT
ATCAGCATTTGTTGTGGCATTCTCGGCATTTTCATCAGACATATGGCCGG
GATGCTCCCGCTT
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