CX044064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 5.168e-93 Identity = 174/276 (63.04%), Postives = 207/276 (75.00%), Query Frame = 3 Query: 6 MKQRTWPDRSTGSRFTALQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRVASLVCKSWNDALRPLREAMVLVRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 818 MKQRTWP RS GSRF++L F ++R ++ S S S S E DF+ LP+D+L KIAA F+ P L+ ASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NLGI+YLQ QPSN +EA+KWL Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAAD 276
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15 Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 345 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 818 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K+ +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15 Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 345 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 818 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K+ +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 547
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15 Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 345 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 818 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K+ +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 4.327e-15 Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = 3 Query: 345 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAAD 818 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K+ +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ S A + K + Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: YBEQ_ECOLI (Uncharacterized protein ybeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.021e-13 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 348 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD--KKEAAISL--YRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADC 821 RG N +A+ + A G + A + G MY + K+ A++ Y+QAA+ G Q NL Y + N A W +++ G+ AQ+Q+A + G GVD + ++A WYL+AA G V A N Y G+G+ ++ A +W +AA+C Sbjct: 110 RGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAEC 273
BLAST of CX044064 vs. ExPASy Swiss-Prot
Match: SE1L2_MOUSE (Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.465e-11 Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = 3 Query: 348 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PSNAEEAVKWLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 791 +G+ ++ KAL FLK A GS AM G MY+E + A + AA G+ G LG+ Y + P N EA+K+ +A+ G AQ+QL + G GV + + A +++ A++ G A+Y + Y+ G G+ S R A Sbjct: 312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTA 466 The following BLAST results are available for this feature:
BLAST of CX044064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX044064 ID=CX044064; Name=CX044064; organism=Citrus sinensis; type=EST; length=823bpback to top |