CX044059

Overview
NameCX044059
Unique NameCX044059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.017e-52
Identity = 97/254 (38.19%), Postives = 163/254 (64.17%), Query Frame = -3
Query:  139 SQQFKFLNKALLATPDVSLEDG-----KLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 885
            +   KF +KA + +   S++DG     +LC++  VEE K+++ L+P+WAT +V+A V++Q +T F  QG TMD+ + ++ +IP+ASL L           +YD   +P+ R FT+N  G T LQR+G G+++S  +M+ A ++E+ RL+  K +   D+  + +  S++W IPQYLL G A+VFT +G  EFFYDQ P  ++S   ++ ++ + +G +LS++LV+++ + T ++G   W  DNLNR HLDYF++
Sbjct:  289 TDNLKFFDKAAVESQSDSIKDGEVNPWRLCSVTQVEELKSIITLLPVWATGIVFATVYSQMSTMFVLQGNTMDQHMGKNFEIPSASLSLFDTVSVLFWTPVYDQFIIPLARKFTRNERGFTQLQRMGIGLVVSIFAMITAGVLEVVRLDYVKTHNAYDQKQIHM--SIFWQIPQYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKITKKNGKPGWIPDNLNRGHLDYFFY 540          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.624e-50
Identity = 97/227 (42.73%), Postives = 143/227 (63.00%), Query Frame = -3
Query:  139 KLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 819
            KLCT+  VEE KAL+RL+PIWAT +V+A V++Q  T F  QG T+D+ +  + KIP+ASL L           +YD + VP  R +T +  G T LQRIG G+++S  SMV A ++E+ RL   + + L ++   TIP +++W +PQY L G A+VFT +G  EFFYDQ P  ++S   ++ ++ +  G +LS+ LV+++ + T   G   W A NLN  HLDYF+W
Sbjct:  316 KLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTVFVLQGNTLDQHMGPNFKIPSASLSLFDTLSVLFWAPVYDKLIVPFARKYTGHERGFTQLQRIGIGLVISIFSMVSAGILEVARLNYVQTHNLYNEE--TIPMTIFWQVPQYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSGGRPGWIAKNLNNGHLDYFFW 540          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.593e-48
Identity = 103/249 (41.37%), Postives = 151/249 (60.64%), Query Frame = -3
Query:  142 SSQQFKFLNKALLATPDVSLEDGKLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFY 888
            S+   +FLN+A L T   S    +LCT+ +VEE K +L+++P+     V +++ AQ  T F KQG T+DR +T +  IP ASL             IYD +FV   R  T NP GIT+LQR+G GM+L  + M++A++ E  RL+ A E+GL  +  V IP S++ L+PQY+L G+AD F  +   EFFYDQ P+ +KS G S   + + VG F+SSIL+S +++ T +  G  W  +NLN + LD +Y
Sbjct:  295 STSSLRFLNRASLKTG--STHKWRLCTITEVEETKQMLKMLPVLFVTFVPSMMLAQIMTLFIKQGTTLDRRLTNNFSIPPASLLGFTTFSMLVSIVIYDRVFVKFMRKLTGNPRGITLLQRMGIGMILHILIMIIASITERYRLKVAAEHGLTHQTAVPIPLSIFTLLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQITKKQ-GRGWIQNNLNESRLDNYY 540          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.593e-48
Identity = 102/244 (41.80%), Postives = 150/244 (61.48%), Query Frame = -3
Query:  142 KFLNKALLATPDVSLEDGKLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFY 873
            +FL++A L T   +     LCT  +VEE K +LR++P+     V +++ AQ  T F KQG T+DR +T S  IP ASL             +YD +FV ITR FT NP GIT+LQR+G G++   + M+VA++ E  RL+ A ++GLI +  V +P +++ L+PQ++L G+AD F  V   EFFYDQ P+ +KS G S   + L +G F+SS L+S ++E T +  G  W  +NLN + LDY+Y
Sbjct:  300 RFLDRASLKTG--TNHKWNLCTTTEVEETKQMLRMLPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPPASLSGFVTLSMLISIVLYDRVFVKITRKFTGNPRGITLLQRMGIGLIFHILIMIVASVTERYRLKVAADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEITKK-RGRGWILNNLNESRLDYYY 540          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.222e-46
Identity = 94/250 (37.60%), Postives = 149/250 (59.60%), Query Frame = -3
Query:  139 KFLNKALLATPDVSLEDG-----KLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 873
            ++L+KA + + + S         +LCT+  VEE K L+R+ PIWA+ ++++ V+AQ +T F +QG  M+  I  S ++P A+L             +YD   VP+ R FT    G T +QR+G G+ +S + M  AA+VEI RL  A + GL++     +P SV W IPQY + G A+VF  +G  EFFYDQ P  ++S   ++ +    +G +LSS++++++   T+R+G + W +DNLN  HLDYF+W
Sbjct:  311 QYLDKAAVISEEESKSGDYSNSWRLCTVTQVEELKILIRMFPIWASGIIFSAVYAQMSTMFVQQGRAMNCKIG-SFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKFTGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVES-GAPVPISVLWQIPQYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTRNGQEGWISDNLNSGHLDYFFW 558          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.126e-42
Identity = 88/260 (33.85%), Postives = 150/260 (57.69%), Query Frame = -3
Query:  139 SQQFKFLNKALL--------ATPDVSLEDGKLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITR---SIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 885
            SQ+ +FLNKA L         +   +L   +LCT + VEE KAL+++IPIW+T ++ +I  +Q ++F   Q  +MDR ++R   S ++PA S  +           +YD   +P+       P  +++  R+G G+ +S ++M ++A+VE  R + A   G  +  N  +  S  WL+PQY+L G+A+  T +G  EFFY + PK + S   S++   + V   L+S++++ +NE TSR+G +SW +DN+N+ H +Y+YW
Sbjct:  288 SQKLRFLNKACLISNREEEIGSDGFALNPWRLCTTDKVEELKALIKVIPIWSTGIMMSINTSQ-SSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHGLAEALTAIGQTEFFYTEFPKSMSSIAASLFGLGMAVASLLASVVLNAVNELTSRNGKESWVSDNINKGHYNYYYW 546          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.009e-41
Identity = 95/254 (37.40%), Postives = 142/254 (55.91%), Query Frame = -3
Query:  139 SQQFKFLNKALLATPDVSLEDG-----KLCTLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 885
            ++QF+ L+KA +   +  +         L TL DVEE K ++R++PIWATC+++  V AQ TT    Q  T+DR+I  S +IP AS+ +           +YD + + + +     P G+  LQRIG G+   S++M VAALVE+KRL TA  +G   K   T+P   + LIPQYL+ GI +     G  +FF  + PK +K     + +S L +G F SS+LV+I+ + T +     W AD+LN+  L  FYW
Sbjct:  299 TEQFRSLDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSETLDRSIG-SFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVK---TLPLGFYLLIPQYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGK--AHPWIADDLNKGRLYNFYW 546          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: S15A4_HUMAN (Solute carrier family 15 member 4 OS=Homo sapiens GN=SLC15A4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18
Identity = 67/237 (28.27%), Postives = 109/237 (45.99%), Query Frame = -3
Query:  139 TLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATM-----DRTITRSIKIPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTIPT--------SVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 810
            T E VE+ KAL++++P++   + Y  V+ Q  T +  Q   +         T    +PAA L +           + D +  PI R     PS    L+RI  GM     S   A ++E KRL   KE  +    N TI          S+WW +PQYLL GI+++F  +   EF Y   PK ++S  + ++    GVG F+ S L+++++              N+N  +L+Y+++
Sbjct:  308 TEEKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLRIPEISNITTTPHTLPAAWLTMFDAVLILLLIPLKDKLVDPILRRHGLLPSS---LKRIAVGMFFVMCSAFAAGILESKRLNLVKEKTI----NQTIGNVVYHAADLSLWWQVPQYLLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGVGSFVGSGLLALVSIKAIGWMSSHTDFGNINGCYLNYYFF 537          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: S15A4_RAT (Solute carrier family 15 member 4 OS=Rattus norvegicus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.796e-18
Identity = 65/237 (27.43%), Postives = 110/237 (46.41%), Query Frame = -3
Query:  139 TLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIK-----IPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTI--------PTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 810
            T + VE+ KAL++++P++   + Y  V+ Q  T +  Q   +      SI      +PAA L +           + D +  P+ R     PS    L+RI  GM   + S   A ++E KRL+  KE  +    N TI           +WW IPQY+L GI+++F  +   EF Y   PK ++S  + ++    G+G F+ S L+++++              N+N  HL Y+++
Sbjct:  307 TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSS---LKRIAVGMFFVTCSAFAAGILESKRLDLVKEKTI----NQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFF 536          
BLAST of CX044059 vs. ExPASy Swiss-Prot
Match: S15A4_MOUSE (Solute carrier family 15 member 4 OS=Mus musculus GN=Slc15a4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.769e-18
Identity = 65/237 (27.43%), Postives = 109/237 (45.99%), Query Frame = -3
Query:  139 TLEDVEEAKALLRLIPIWATCLVYAIVFAQYTTFFTKQGATMDRTITRSIK-----IPAASLQLXXXXXXXXXXXIYDCIFVPITRYFTQNPSGITMLQRIGAGMLLSSISMVVAALVEIKRLETAKEYGLIDKPNVTI--------PTSVWWLIPQYLLCGIADVFTIVGLQEFFYDQIPKELKSFGLSIYMSVLGVGGFLSSILVSIINEATSRDGGDSWFADNLNRAHLDYFYW 810
            T + VE+ KAL++++P++   + Y  V+ Q  T +  Q   +      SI      +PAA L +           + D +  P+ R     PS    L+RI  GM     S   A ++E KRL+  KE  +    N TI           +WW IPQY+L GI+++F  +   EF Y   PK ++S  + ++    G+G F+ S L+++++              N+N  HL Y+++
Sbjct:  309 TEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYALQSLHLKIPEISSITTTHHTLPAAWLTMFDAVLILLLIPLKDKLVDPVLRRHGLLPSS---LKRIAVGMFFVMCSAFAAGILESKRLDLVKEKTI----NQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGIGSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFF 538          
The following BLAST results are available for this feature:
BLAST of CX044059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PTR1_ARATH1.017e-5238.19Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH1.624e-5042.73Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH2.593e-4841.37Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH2.593e-4841.80Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
PTR2_ARATH9.222e-4637.60Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR2X_ARATH2.126e-4233.85Probable peptide transporter At1g52190 OS=Arabidop... [more]
CHL1_ARATH4.009e-4137.40Nitrate/chlorate transporter OS=Arabidopsis thalia... [more]
S15A4_HUMAN2.141e-1828.27Solute carrier family 15 member 4 OS=Homo sapiens ... [more]
S15A4_RAT2.796e-1827.43Solute carrier family 15 member 4 OS=Rattus norveg... [more]
S15A4_MOUSE4.769e-1827.43Solute carrier family 15 member 4 OS=Mus musculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_15B02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15B02-C3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044059 ID=CX044059; Name=CX044059; organism=Citrus sinensis; type=EST; length=893bp
TTAAATCTAGTTTCGTAATCCCATAACTTTTTTTTTTAAAAAAAAGGAAA
CATCTAAACAATATTAATTTTCTCTGTTATAAGATTTTGCAAAATACAAA
AAGGCTAGCAATCCTCCAGCACTAAGTGCAGCAAGTAACCAATAAAAATA
ATCAAGATGCGCTCGATTCAAATTATCAGCAAACCAGCTGTCCCCGCCAT
CTCTACTTGTTGCTTCATTGATAATTGACACCAGAATGCTACTAAGGAAG
CCCCCAACTCCAAGCACACTCATGTAAATGGAGAGACCAAAACTCTTTAA
TTCTTTGGGAATTTGATCATAGAAGAATTCTTGTAGACCAACTATAGTGA
AAACATCTGCAATCCCACATAATAAATATTGAGGAATCAACCACCACACA
CTCGTTGGAATTGTCACATTTGGCTTGTCAATCAGTCCATACTCTTTTGC
TGTTTCAAGCCTTTTTATTTCTACTAAAGCTGCAACTACCATGGAAATAG
ATGATAAAAGCATCCCAGCTCCAATTCTTTGAAGCATTGTGATACCAGAA
GGATTTTGGGTGAAATATCTTGTTATCGGAACAAAAATGCAATCATAGAT
TGGAATGAAGGTGATAATGCCAATACCAATAAACAATTGCAGTGAAGCAG
CTGGGATTTTGATGCTTCGAGTGATGGTTCTGTCCATTGTAGCTCCTTGC
TTTGTGAAGAACGTTGTGTATTGTGCAAATACAATAGCATACACCAAGCA
GGTTGCCCATATTGGAATAAGTCTTAATAATGCCTTTGCCTCTTCAACAT
CCTCAAGTGTACACAGCTTCCCATCTTCCAATGACACATCTGGTGTTGCA
AGCAAGGCCTTGTTCAGAAACTTGAACTGCTGAGAACTTTGAG
back to top