DN134822

Overview
NameDN134822
Unique NameDN134822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4793 contig Csv1_Contig4793:679..1187. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_ARATH (Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.180e-47
Identity = 103/170 (60.59%), Postives = 115/170 (67.65%), Query Frame = 2
Query:    2 AGTXXXXXXXXXXXXVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARALVPGAGTSGA-PPAIASGDRQTGGGEEGRPAGLXXXXXXXXXXXGPVINSGSFSNQKSPVVNEPTMTKDPMLSSSNFLGR 508
            AGT            VSTSIEALCRGYP+EFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQL  PP+RAL P  GTS A PP I++ DR T G EEGRP              G + NSG+ SNQ +      +  +D M+ SS+   +
Sbjct:  218 AGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLTAPPSRALNPAVGTSAALPPGISNIDRYT-GEEEGRP----HMESSRRRVSGALDNSGNISNQPT-----SSSARDSMIPSSSLFAQ 377          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1E_CHICK (Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKY--------------------QQSQLATPPARALVPGAGTSGAPPAIASGDR 328
            +ST IE LC+GYP+EF++Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+                    +  QL     RAL PG      PPA A+G+R
Sbjct:  233 MSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARNPEDMDRERREHEREERMGQLRGSATRALPPG------PPAGATGNR 340          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1DB_DANRE (Casein kinase I isoform delta-B OS=Danio rerio GN=csnk1db PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.195e-23
Identity = 54/127 (42.52%), Postives = 74/127 (58.27%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLA------------------TPPARALVPGAG-----TSGAPPAIASGDRQTGGGEEGRP 358
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  ++ A                   P AR +   +G       GAPP   +    T      RP
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRTAEEADRERRERDERMRHSRNPAARGIPAASGRPRPTQDGAPPTPLTPTSHTANTSSPRP 359          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_XENLA (Casein kinase I isoform delta OS=Xenopus laevis GN=csnk1d PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAAEDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_RAT (Casein kinase I isoform delta OS=Rattus norvegicus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_PONAB (Casein kinase I isoform delta OS=Pongo abelii GN=CSNK1D PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_MOUSE (Casein kinase I isoform delta OS=Mus musculus GN=Csnk1d PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_HUMAN (Casein kinase I isoform delta OS=Homo sapiens GN=CSNK1D PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_BOVIN (Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.867e-23
Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  S+ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAER 306          
BLAST of DN134822 vs. ExPASy Swiss-Prot
Match: KC1D_XENTR (Casein kinase I isoform delta OS=Xenopus tropicalis GN=csnk1d PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.387e-23
Identity = 44/74 (59.46%), Postives = 61/74 (82.43%), Query Frame = 2
Query:   47 VSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPAR 268
            +ST IE LC+GYP+EFA+Y ++CRSLRFDDKPDY+YL+++FR+LF R+GF +DYVFDW +LK+  ++ A    R
Sbjct:  233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGANRAAEDAER 306          
The following BLAST results are available for this feature:
BLAST of DN134822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
KC1D_ARATH2.180e-4760.59Casein kinase I isoform delta-like OS=Arabidopsis ... [more]
KC1E_CHICK1.287e-2347.37Casein kinase I isoform epsilon OS=Gallus gallus G... [more]
KC1DB_DANRE2.195e-2342.52Casein kinase I isoform delta-B OS=Danio rerio GN=... [more]
KC1D_XENLA2.867e-2360.81Casein kinase I isoform delta OS=Xenopus laevis GN... [more]
KC1D_RAT2.867e-2360.81Casein kinase I isoform delta OS=Rattus norvegicus... [more]
KC1D_PONAB2.867e-2360.81Casein kinase I isoform delta OS=Pongo abelii GN=C... [more]
KC1D_MOUSE2.867e-2360.81Casein kinase I isoform delta OS=Mus musculus GN=C... [more]
KC1D_HUMAN2.867e-2360.81Casein kinase I isoform delta OS=Homo sapiens GN=C... [more]
KC1D_BOVIN2.867e-2360.81Casein kinase I isoform delta OS=Bos taurus GN=CSN... [more]
KC1D_XENTR6.387e-2359.46Casein kinase I isoform delta OS=Xenopus tropicali... [more]

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Properties
Property NameValue
Genbank descriptionwca01g04 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01g04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN134822 ID=DN134822; Name=DN134822; organism=Citrus sinensis; type=EST; length=508bp
AGCAGGAACTAAGAAACAGAAGTATGAGAAAATTAGTGAGAAGAAGGTTT
CTACTTCAATTGAAGCCTTATGTCGGGGTTATCCAACAGAATTTGCATCG
TACTTCCATTACTGTCGTTCACTTCGATTTGATGATAAGCCAGATTATGC
CTATCTGAAAAGAATTTTCCGTGACCTCTTCATTCGAGAAGGCTTCCAGT
TTGACTATGTATTTGACTGGACCATTTTAAAGTATCAGCAATCACAGCTG
GCTACACCTCCAGCCCGAGCCCTTGTCCCTGGTGCTGGAACTAGTGGTGC
ACCTCCTGCTATAGCTAGTGGAGACAGACAAACAGGAGGTGGGGAAGAAG
GTCGACCAGCTGGTTTATCTTCAATGGATTCTTCTCGGAGGAGAATGTCA
GGACCAGTTATAAACTCTGGAAGTTTTTCGAACCAAAAGAGTCCAGTTGT
AAATGAACCTACAATGACTAAAGACCCAATGTTATCAAGCTCCAACTTCT
TGGGGCGC
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