CX044044

Overview
NameCX044044
Unique NameCX044044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ2_CYACA (Protein cfxQ homolog OS=Cyanidium caldarium GN=cfxQ PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.414e-21
Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT++ +K A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +V+IFAGY E M R  ASN G   RV    +F D+  EEL  I  I +  Q
Sbjct:   99 RDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYL--YRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKEKMDRFYASNPGLSSRVANHVNFPDYTPEELLMIGKIMLQEQ 212          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_PORPU (Protein cfxQ homolog OS=Porphyra purpurea GN=cfxQ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKAD-DKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K+A GG+LF+DEAY L    KAD ++DYG EA+E ++ VM+  +  +VVIFAGY + M++   SN G   RV     F D+ SEEL +I  + +  Q
Sbjct:  110 RDDLVGQYIGHTAPKTKEVLKQAMGGVLFIDEAYYL---YKADNERDYGSEAIEILLQVMENQRNDLVVIFAGYKDRMEKFYESNPGLSSRVANHVDFPDYTSEELLQIAKMMIEEQ 223          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ1_CYACA (Protein cfxQ homolog OS=Cyanidium caldarium GN=cfxQ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.117e-21
Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K+A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +V+IFAGY E M +  ASN G   RV     F ++  EEL KI  + +  Q
Sbjct:  113 RDDLVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYL--YKPDNERDYGSEAIEILLQVMENQREDLVIIFAGYKEKMDKFYASNPGLASRVANHVDFPEYRPEELLKIAEMMLQEQ 226          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_ODOSI (Protein cfxQ homolog OS=Odontella sinensis GN=cfxQ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.022e-21
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K+A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +VVI AGY EPM +   SN G   R+     F D+  EEL KI  + +  Q
Sbjct:  104 RDDLVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYL--YKPDNERDYGSEAIEILLQVMENQRDDLVVILAGYKEPMDKFYESNPGLSSRIANHIDFPDYTVEELLKISKMMLEEQ 217          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_CYAME (Protein cfxQ homolog OS=Cyanidioschyzon merolae GN=cfxQ PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.198e-20
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT++ +K A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +V+IFAGY + M R   SN G   RV    +F D+  EEL  I  I +  Q
Sbjct:  106 RDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYL--YRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKDKMDRFYTSNPGLASRVANHVNFPDYTPEELLMIGKIMLQEQ 219          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_PORYE (Protein cfxQ homolog OS=Porphyra yezoensis GN=cfxQ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.945e-20
Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKAD-DKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K+A GG+LF+DEAY L    KAD ++DY  EA+E ++ VM+  +  +VVIFAGY + M++   SN G   RV     F D+ S+EL +I  + +  Q
Sbjct:  109 RDDLVGQYIGHTAPKTKEVLKQAMGGVLFIDEAYYL---YKADNERDYDSEAIEILLQVMENQRNDLVVIFAGYKDRMEKFYESNPGLSSRVANHVDFPDYTSDELLQIAKMMIEEQ 222          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_GALSU (Protein cfxQ homolog OS=Galdieria sulphuraria GN=cfxQ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.945e-20
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = -2
Query:  512 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKI 829
            R DLVG+++GHT PKT+  +K A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +VVI AGY + M+R   SN G   R+T    F D+ +EEL +I
Sbjct:  116 RDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYL--YKPDNERDYGSEAIEILLQVMENQRNDLVVILAGYKDKMERFYQSNPGLSSRITNHVDFPDYTAEELLEI 221          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CBBX_RHOSH (Protein cbbX OS=Rhodobacter sphaeroides GN=cbbX PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19
Identity = 49/116 (42.24%), Postives = 76/116 (65.52%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +VVI AGY++ M+    SN GF  R+     F D++ EEL +I    +++Q
Sbjct:  107 RDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYL--YRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMENFFQSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDDQ 220          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_GUITH (Protein cfxQ homolog OS=Guillardia theta GN=cfxQ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.853e-19
Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = -2
Query:  488 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQ 829
            R DLVG+++GHT PKT+  +K A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +V+IFAGY + M     SN G   RV     F D+  EEL  I  I +  Q
Sbjct:  105 RDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYL--YKPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKDRMDSFYESNPGLSSRVANHIDFPDYTPEELLIIGKIMLEEQ 218          
BLAST of CX044044 vs. ExPASy Swiss-Prot
Match: CFXQ_XANFL (Protein cfxQ OS=Xanthobacter flavus GN=cfxQ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.033e-19
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = -2
Query:  512 RTDLVGEFVGHTGPKTRRRIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGK--VVVIFAGYSEPMKRVIASNEGFCRRVTKFFHFNDFNSEELAKI 829
            R DLVG+++GHT PKT+  +K+A GG+LF+DEAY L   +  +++DYG EA+E ++ VM+  +  +VVI AGY + M R   SN GF  R+     F D+   EL +I
Sbjct:  118 RDDLVGQYIGHTAPKTKEILKKAMGGVLFIDEAYYL--YRPENERDYGQEAIEILLQVMENQRDDLVVILAGYKDRMDRFFESNPGFRSRIAHHIDFPDYEDAELVEI 223          
The following BLAST results are available for this feature:
BLAST of CX044044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CFXQ2_CYACA2.414e-2145.69Protein cfxQ homolog OS=Cyanidium caldarium GN=cfx... [more]
CFXQ_PORPU4.117e-2146.15Protein cfxQ homolog OS=Porphyra purpurea GN=cfxQ ... [more]
CFXQ1_CYACA4.117e-2143.97Protein cfxQ homolog OS=Cyanidium caldarium GN=cfx... [more]
CFXQ_ODOSI7.022e-2143.97Protein cfxQ homolog OS=Odontella sinensis GN=cfxQ... [more]
CFXQ_CYAME1.198e-2043.97Protein cfxQ homolog OS=Cyanidioschyzon merolae GN... [more]
CFXQ_PORYE5.945e-2044.44Protein cfxQ homolog OS=Porphyra yezoensis GN=cfxQ... [more]
CFXQ_GALSU5.945e-2045.37Protein cfxQ homolog OS=Galdieria sulphuraria GN=c... [more]
CBBX_RHOSH1.014e-1942.24Protein cbbX OS=Rhodobacter sphaeroides GN=cbbX PE... [more]
CFXQ_GUITH3.853e-1943.10Protein cfxQ homolog OS=Guillardia theta GN=cfxQ P... [more]
CFXQ_XANFL5.033e-1944.44Protein cfxQ OS=Xanthobacter flavus GN=cfxQ PE=3 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_15A06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15A06-A11-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044044 ID=CX044044; Name=CX044044; organism=Citrus sinensis; type=EST; length=830bp
CTGTTCCAAAAGATCAAATATAAAAAAACGAGTTCACTAGAATACATAAG
AAAAACCCCAAGGGCATCAATAGATCCACTCAAGCAGCAAATTCAACAAC
AAACCCCCCAGTTTGGAGGCAAAAGAATGAAGGCATATGTAAACAGATCT
CCTGCTTCGCAATTCAATGTAACCCAGTCAGGCTGCCAAAAGAATGATTA
CAAGCTAGTCTTTTAAATTTCTTATCCTAAATGCCTAAGCGTAATAAAAG
CTTTAGACCTGCTTCCAAATCCTCTAAGGTGATGGTGCGCAATTCATCAG
TGTCTAAACAGTCAAAACTGAGCCTAAGGTCCAAATTCTCCCTTGCATTG
ACTAGCATCGGATCCACTAAACCTCCATTCATCTCCCTGCGCTGCTTTTC
TGTTGTTTCTTTTTCTATGAGTGCTGCAATTGCATCCATGCTACAAGAAG
AGTGCAGCTTAAATCCATACAACAAGCTATCCTCTGTTTGATTGTTCATC
TTGATATGGAGGATCTTGGCCAACTCTTCAGAATTGAAATCATTAAAATG
AAAAAACTTGGTTACCCTTCGGCAGAAGCCTTCATTAGAAGCAATTACGC
GCTTCATTGGTTCACTGTAGCCAGCAAATATGACTACAACTTTTCCGCCA
TCCATAACAGACATGATCTCTTCTAAGGCTTCTATGCCATAGTCTTTATC
ATCTGCTTTCTGCATGGGTATTAATCGATAAGCTTCGTCCACAAAAAGAA
TTCCTCCCTCAGCTTCTTTTATCCTTCTTCTAGTCTTTGGTCCAGTATGA
CCAACAAATTCACCAACCAAATCTGTTCGC
back to top