CX044010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2) HSP 1 Score: 246.899 bits (629), Expect = 9.641e-65 Identity = 131/172 (76.16%), Postives = 141/172 (81.98%), Query Frame = 1 Query: 301 QSQLGQQ-IRVACKPNRNERNLQQSRRGVVRCEVAVDPSSAS------ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 Q+ LG +RV K NR R L Q RCE++ SAS ALEQLK SA DRYTKERSSIVVIGLS+HTAPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYV+ALSQHRGVKEVTEWMSKTSGIPV+E+C+HRFLLYNKDATQH+FEVSAGL Sbjct: 34 QTPLGLNGVRVLPKNNRTRRGLIQK----ARCELSASSDSASNAASISALEQLKNSAADRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDATQHIFEVSAGL 201
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 8.162e-64 Identity = 126/160 (78.75%), Postives = 136/160 (85.00%), Query Frame = 1 Query: 322 IRVACKPNRNERNLQQSRRGVVRCEVAVDPSSAS--ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 IR NRN+R L Q RCE++ +AS ALEQLK SA DRYTKERSSIVVIGLS+HTAPVEMREKLAIPEAEWPRAI ELC LNHIEEAAVLSTCNRMEIYV+ALSQHRGVKEVTEWMSKTSGIPV+E+C+HRFLLYNKD TQH+FEVSAGL Sbjct: 37 IRALPMNNRNKRGLIQR----ARCEISPSNKAASISALEQLKTSAIDRYTKERSSIVVIGLSIHTAPVEMREKLAIPEAEWPRAIAELCGLNHIEEAAVLSTCNRMEIYVLALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNKDVTQHIFEVSAGL 192
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.290e-63 Identity = 130/172 (75.58%), Postives = 139/172 (80.81%), Query Frame = 1 Query: 334 CKPNRNERNLQQSRRGV-----VRCEVA----------VDP---SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 CK R R L Q R GV +CE+A +DP S+ SALEQLK SA DRYTKERSSIVVIGLS+HT PVEMREKLAIPEAEWPRAIGELC LNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPV+E+C+HRFLLYN DATQH+FEVSAGL Sbjct: 38 CKSIRTRRILFQ-RTGVSSFTPFKCELASSDVLVQNDEIDPPKSSNLSALEQLKTSAVDRYTKERSSIVVIGLSIHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVSEICQHRFLLYNNDATQHIFEVSAGL 208
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.060e-55 Identity = 106/125 (84.80%), Postives = 115/125 (92.00%), Query Frame = 1 Query: 421 SALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 SALE LK S+ +RYTKER SIVVIGL+VHTAPVE+REKLAIPEA+WP IGELC LNHIEEAAVLSTCNR+EIYVVALSQHRGVKEVTEWMSK SGIP++ELC+HR LLYN DATQHLFEVSAGL Sbjct: 76 SALELLKTSSVNRYTKERISIVVIGLNVHTAPVELREKLAIPEAQWPPGIGELCALNHIEEAAVLSTCNRIEIYVVALSQHRGVKEVTEWMSKRSGIPISELCKHRVLLYNTDATQHLFEVSAGL 200
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.549e-49 Identity = 104/147 (70.75%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 373 RRGVVRCEVAVDPSSAS------ALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 R GVVRC+ D +AS ALEQ K SA DRY KE+SSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F+L + DAT+HLFEVSAGL Sbjct: 37 RSGVVRCDAGGDAQAASKAASITALEQFKISA-DRYMKEKSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFEVSAGL 182
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.807e-48 Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 1 Query: 382 VVRCEVAVDP----------SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 VVRC+ V+ +S +ALEQ K SA DRY KERSSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F+L + DAT+HLFEVSAGL Sbjct: 46 VVRCDAGVEAQAQAQAVAKAASVAALEQFKISA-DRYMKERSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFEVSAGL 192
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 4.807e-48 Identity = 102/148 (68.92%), Postives = 116/148 (78.38%), Query Frame = 1 Query: 382 VVRCEVAVDP----------SSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 VVRC+ V+ +S +ALEQ K SA DRY KERSSI VIGLSVHTAPVEMREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F+L + DAT+HLFEVSAGL Sbjct: 46 VVRCDAGVEAQAQAQAVAKAASVAALEQFKISA-DRYMKERSSIAVIGLSVHTAPVEMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSDATRHLFEVSAGL 192
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.497e-45 Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 382 VVRCE--------VAVDPSSASALEQLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 VVRC+ +A +S +ALEQ K SA DRY KE+SSI VIGLS+HTAPVEMREKLA+ E WPRA+ EL NLNHIE+AAVLS CNRMEIYVVALS +RG++E+ +WMS SGIP EL EH F+ + DAT+HLFEVS+GL Sbjct: 44 VVRCDAGPGVPAQMAAMAASVAALEQFKISA-DRYMKEKSSIAVIGLSIHTAPVEMREKLAVAEELWPRAVAELTNLNHIEKAAVLSPCNRMEIYVVALSWNRGIREIVDWMSMKSGIPAVELREHLFMFRDSDATRHLFEVSSGL 188
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.090e-43 Identity = 90/121 (74.38%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 433 QLKASAPDRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 Q K SA DRY KE+SSI VIGLSVHTAPV+MREKLA+ E WPRAI EL +LNHIEEAAVLSTCNRMEIYVVALS +RG++EV +WMSK SGIP +EL EH F+L + AT+HLFEVSAGL Sbjct: 1 QFKISA-DRYIKEKSSIAVIGLSVHTAPVDMREKLAVAEELWPRAISELTSLNHIEEAAVLSTCNRMEIYVVALSWNRGIREVVDWMSKKSGIPASELREHLFMLRDSGATRHLFEVSAGL 120
BLAST of CX044010 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP4 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.965e-25 Identity = 55/106 (51.89%), Postives = 78/106 (73.58%), Query Frame = 1 Query: 478 SIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGIPVAELCEHRFLLYNKDATQHLFEVSAGL 795 +I V+GLS TAPVE+REKL++PE AI +LC+ HIEE A+LSTCNR+EIY+V G++EVT+++S+ S +P+ EL +H F+L ++DA HL V+AGL Sbjct: 2 NIAVVGLSHKTAPVEVREKLSVPEDGLEGAIAQLCSYPHIEEVAILSTCNRLEIYIVTSETESGIREVTQFLSEWSHLPLRELRQHLFILLHQDAVMHLMRVAAGL 107 The following BLAST results are available for this feature:
BLAST of CX044010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 159
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044010 ID=CX044010; Name=CX044010; organism=Citrus sinensis; type=EST; length=796bpback to top |