CX044003

Overview
NameCX044003
Unique NameCX044003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 6.157e-58
Identity = 100/200 (50.00%), Postives = 146/200 (73.00%), Query Frame = -3
Query:  308 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN-----NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 892
            RERLNGHYG  AFV  NT SA P+L +I+ I G I Y++ GLH G+ H+++FVL L+A + +VESLMM +AS+VPN+L GII GAGIQG+ +L  GFFRLPND+P PFW+YP+ YI+FH +A QG ++N+  GL FD+      + GE VL + +Q+ +  SKW++L+++  M++ YR++F  +IKT E + P V+ +++
Sbjct:  464 RERLNGHYGVAAFVIANTLSATPFLIMITFISGTICYFMVGLHPGFTHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGFFRLPNDIPKPFWRYPMSYISFHFWALQGQYQNDLRGLTFDSQGSAFKIPGEYVLENVFQIDLHRSKWINLSVILSMIIIYRIIFFIMIKTNEDVTPWVRGYIA 663          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.060e-44
Identity = 84/201 (41.79%), Postives = 134/201 (66.67%), Query Frame = -3
Query:  308 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKF------DNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 892
            +ERL+G+YG + ++  N  S+ P+L  IS+I G I Y L     G+ H+ +F L +F  + ++ESLMM+VAS+VPN+L G+ITGAG+ G++++  GFFRL  DLP  FW+YP+ YI++  +A QG +KN+F GL+F      +  + GE+V+   + +++ YSKW DLA +  ++V YRL+F  ++K  E+  P +KA  +
Sbjct:  442 KERLSGYYGVSVYILSNYISSFPFLVAISVITGTITYNLVKFRPGFSHYAFFCLNIFFSVSVIESLMMVVASVVPNFLMGLITGAGLIGIIMMTSGFFRLLPDLPKIFWRYPVSYISYGSWAIQGGYKNDFLGLEFEPLFPGEPKMTGEEVIEKVFGVKVTYSKWWDLAAVVAILVCYRLLFFVVLKLRERAGPALKAIQA 642          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.511e-43
Identity = 83/201 (41.29%), Postives = 135/201 (67.16%), Query Frame = -3
Query:  308 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVVKAFMS 892
            +ERL+G+YG + ++  N  S+ P+L  I+LI G+I Y +     G  H+ +F L +F  + ++ESLMM+VASLVPN+L G+ITGAGI G++++  GFFRL  DLP  FW+YP+ ++++  +A QG +KN+F GL+FD        + GEQV+   + +Q+ +SKW DL+ +  ++V YR++F  ++K  E+ +P +KA  +
Sbjct:  443 KERLSGYYGVSVYIISNYVSSFPFLVAIALITGSITYNMVKFRPGVSHWAFFCLNIFFSVSVIESLMMVVASLVPNFLMGLITGAGIIGIIMMTSGFFRLLPDLPKVFWRYPISFMSYGSWAIQGAYKNDFLGLEFDPMFAGEPKMTGEQVINKIFGVQVTHSKWWDLSAIVLILVCYRILFFIVLKLKERAEPALKAIQA 643          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.200e-39
Identity = 80/196 (40.82%), Postives = 119/196 (60.71%), Query Frame = -3
Query:  323 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDN------NLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIKTVEKMKPVV 892
            RERLNGHYG   +   N  S+LP++ L+ L   +I  Y+     G  HF Y  L L   +  VES MM++AS+VPN+L G++ GAG  G+M+L  GFFR   DLP  FW+YP+ YI +  +A QG +KNE  G+++D+       + GE +L+    +    SKW+DLA++  +++ YR+ F  I+K  EK+ PV+
Sbjct:  437 RERLNGHYGVAVYTVSNLLSSLPFIILMCLSTSSITIYMVRFQSGGSHFFYNCLDLICAITTVESCMMMIASVVPNFLMGVMLGAGYIGIMVLSAGFFRFFPDLPMVFWRYPVSYINYGAWALQGAYKNEMIGVEYDSPLPLVPKMKGELILQTVLGINPESSKWLDLAVVMMILIGYRIAFFAILKFREKVFPVI 632          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.871e-25
Identity = 57/185 (30.81%), Postives = 100/185 (54.05%), Query Frame = -3
Query:  350 ERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD----NNLDGEQVLRDKWQLQMG-YSKWVDLAILFGMVVFYRLVFLGIIK 889
            E  N H GA  F+ G    ++P+L L+S+    + Y++ GL + +   +YFVL  F C+L+ E LM+ +A +  +     +T   +  +M+L  G FR+   LP P W YP  YI+FH Y+ +G+ +NE+ G  F      ++ G Q ++  +Q+     +KW ++ +L  M   YRL+   +++
Sbjct:  495 EASNQHSGAFVFLLGQFLGSIPFLFLMSISSSLVFYFMVGLRDDFSLLMYFVLNFFMCLLVNEGLMLFIACIWRDVYWSTLTLISVHVIMMLAAGHFRIRTALPKPVWTYPFAYISFHTYSIEGLLENEYLGEVFAVGEVRSISGYQAIQGNYQISPDTNAKWRNMLVLLAMAFGYRLLVYVLLR 679          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.135e-18
Identity = 61/200 (30.50%), Postives = 99/200 (49.50%), Query Frame = -3
Query:  332 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFD------------NNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIIKTVEKMK 892
            RE  +G Y  ++ +  NT   LPYL +IS+I    VY+L GL   +Q F YFVL+++  +L+  S ++ ++SL PNY+TG      +     L  G+F     LP  +W + +Y+ + +KYA   +  NE+  L                 + G  VL+ K   +    +W ++ +L G  V YR L FL +++ V   K
Sbjct:  393 RETSSGIYRLSSHILANTLVFLPYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWIILLMANSFVLFLSSLAPNYITGTSLVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLASKCLVWLEEAQTKICMVTGGDVLKKKGLHEK--QRWFNVYVLLGFFVLYRVLCFLALLRRVSGSK 588          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.062e-17
Identity = 49/188 (26.06%), Postives = 106/188 (56.38%), Query Frame = -3
Query:  353 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK---FDNN-----LDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGII 892
            +E   G Y  ++++  NT + +P+L ++SL+    VY++ GL+   Q F +FVL ++  +L+  SL++ ++++ P++++G      + G   L  G+F     +P P W + +YY++ ++Y  + M  NE+  ++   F +      + GE VL+++   +   ++W+++ I+    VFYR++  GI+
Sbjct:  432 KESSRGSYRISSYMIANTIAFVPFLFVVSLLFSIPVYWIVGLNPSIQAFSFFVLCVWLIILMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKEKIPKP-WMF-MYYVSLYRYPLESMVVNEYWSMREECFSSGNMGCLMTGEDVLKERGLDK--DTRWINVGIMLAFFVFYRILCWGIL 615          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.617e-16
Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = -3
Query:  332 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNE-----------FEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYR-LVFLGIIKTVEKMK 892
            RE  +G Y  ++ +  NT   LPYL LI++I    +Y+L GL   +Q   YFVL+++  +L+  S ++ ++SL PNY+ G  +   +     L  G+F     LP  +W + +Y+ + +KYA   +  NE           FE    ++ L     + DK  L     +W ++ +L G  V YR L FL ++K V   K
Sbjct:  381 RETSSGLYRLSSHILANTLVFLPYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWIIVLMANSFVLFLSSLAPNYIAGTSSVTILLAAFFLFSGYFISKESLP-KYWLF-MYFFSMYKYALDALLINEYSCLHNKCLVWFEEASVNSCLVTGGDVLDKNGLH-ERQRWFNVYMLLGFFVLYRVLCFLVLLKRVSGSK 576          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB10G_ARATH (ABC transporter G family member 10 OS=Arabidopsis thaliana GN=ABCG10 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.893e-15
Identity = 47/175 (26.86%), Postives = 90/175 (51.43%), Query Frame = -3
Query:  368 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLKFDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLV 892
            RE     Y   ++V  +T   +P+L +IS++    VY+L GL      F+YF L+++  +L+  S +   ++LVPN++ G    +G+ G   L  G+F   + +P  +W++ ++Y++  KY ++ +  NE+ G  F    D ++             KW +L I+   +V YR++
Sbjct:  415 RETSRRAYRVLSYVLADTLIFIPFLLIISMLFATPVYWLVGLRRELDGFLYFSLVIWIVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFIAKDRIP-VYWEF-MHYLSLFKYPFECLMINEYRGDVFLKQQDLKE-----------SQKWSNLGIMASFIVGYRVL 576          
BLAST of CX044003 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.446e-15
Identity = 49/187 (26.20%), Postives = 98/187 (52.41%), Query Frame = -3
Query:  350 RERLNGHYGATAFVFGNTFSALPYLALISLIPGAIVYYLPGLHEGYQHFIYFVLLLFACMLLVESLMMIVASLVPNYLTGIITGAGIQGLMILGGGFFRLPNDLPHPFWKYPLYYIAFHKYAYQGMFKNEFEGLK------FDNNLDGEQVLRDKWQLQMGYSKWVDLAILFGMVVFYRLVFLGIIK 892
            +E  +G Y  +++   N    LP+L +++++    VY+L GL+  +  F++F LL++  +    S+++  ++LVPN++ G    +G+ G   L  G+F   +++P  +W + ++YI+  KY ++G   NEF          F   L  E+ L  K +     S+W ++ I+   V+ YR +   I++
Sbjct:  453 KETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYWLVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHEIP-GYWIF-MHYISLFKYPFEGFLINEFSKSNKCLEYGFGKCLVTEEDLL-KEERYGEESRWRNVVIMLCFVLLYRFISYVILR 636          
The following BLAST results are available for this feature:
BLAST of CX044003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AB11G_ARATH6.157e-5850.00ABC transporter G family member 11 OS=Arabidopsis ... [more]
AB15G_ARATH5.060e-4441.79ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH2.511e-4341.29ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB13G_ARATH2.200e-3940.82ABC transporter G family member 13 OS=Arabidopsis ... [more]
AB3G_ARATH6.871e-2530.81ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB8G_ARATH8.135e-1830.50ABC transporter G family member 8 OS=Arabidopsis t... [more]
AB23G_ARATH1.062e-1726.06ABC transporter G family member 23 OS=Arabidopsis ... [more]
AB4G_ARATH2.617e-1630.15ABC transporter G family member 4 OS=Arabidopsis t... [more]
AB10G_ARATH2.893e-1526.86ABC transporter G family member 10 OS=Arabidopsis ... [more]
AB5G_ARATH6.446e-1526.20ABC transporter G family member 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044003 ID=CX044003; Name=CX044003; organism=Citrus sinensis; type=EST; length=894bp
GAATTGGGGGTACCGGGCCCCCTTTTTTTAAAAATTAAAGATAAAGAAGT
AAATCTTGATCATACGAAAATACAATAATAAAAGTAGTTAAAGGATGTTT
CAAAGCTAAAATATGCTTCCTAATTAAATTATTCCTCTTCCACCCATGAG
AACAGAGTTTTTGTACCTACTTCGAGCAATTTTACTAGTTGAACTAACGA
ATATCCGAAGAGTCTTTTGTTCACGATCACTGGTAAAATATTTTGTCTTC
TTGTGGAGGTGTAGCACACGGATTTTCCATGATTTGAGTTGTTTGTTTCA
TGGGCACAGACATAAAAGCTTTAACCACAGGCTTCATCTTTTCAACTGTC
TTGATGATTCCCAAGAATACAAGTCGATAAAAAACCACCATACCAAACAA
GATAGCAAGATCAACCCACTTAGAATATCCCATTTGCAGTTGCCATTTAT
CTCTCAAAACCTGTTCACCATCTAGATTGTTGTCAAATTTCAGACCTTCA
AACTCGTTCTTGAACATTCCTTGGTACGCATATTTATGGAAAGCAATATA
ATATAATGGGTATTTCCAAAATGGATGAGGAAGATCATTTGGCAATCGAA
AAAATCCGCCGCCTAATATCATAAGGCCTTGAATTCCAGCTCCTGTTATG
ATGCCCGTCAGATAATTGGGCACCAAGCTTGCAACGATCATCATTAGGCT
CTCGACGAGCAACATGCAAGCAAACAATAACAAAACAAAGTATATGAAGT
GTTGATATCCTTCGTGAAGTCCCGGAAGGTAATAAACTATCGCTCCAGGA
ATCAATGAAATGAGAGCTAAGTATGGCAGCGCAGAAAATGTATTGCCAAA
CACAAACGCAGTGGCACCATAGTGCCCGTTTAGTCTCTCTCGCT
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