CX043997

Overview
NameCX043997
Unique NameCX043997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.145e-39
Identity = 96/221 (43.44%), Postives = 141/221 (63.80%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKKELK-YNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAPTYFPPHY  T  S+ G    F+LVDG VAA +P+LL+IS ++  + +++P F     ++ + ML+LSLGTGT  +  K Y A +A+KWGI +W+     +P+ ++ S  SS + D+++S +FQ+  S++NYLR+Q++ LTG A + D A+  NM  LV+ G  LLK+ VS  N E           T E AL  FAKLLS++ K R
Sbjct:  166 DAKMYDICYSTAAAPTYFPPHYFATNTSN-GDQYDFNLVDGDVAAVDPSLLSIS-VATRLAQEDPAFASIKSLNYKQMLLLSLGTGTNSEFAKNYTAEEAAKWGILQWM-----SPLWEMRSAASSYMNDYYLSTVFQALDSQNNYLRVQENALTGTATTFDDASVANMILLVQVGENLLKKSVSEDNHE-----------TYEVALKRFAKLLSDRKKLR 368          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37
Identity = 92/222 (41.44%), Postives = 137/222 (61.71%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PT2K3_SOLTU (Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.828e-37
Identity = 93/222 (41.89%), Postives = 138/222 (62.16%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAPTYFPPHY  T  S+ G    F+LVDG VA   +P LL++S ++ ++ + +P+F     ++ + ML+LSLGTGT  + +  Y A +A+KWG   WI       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G KLLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPTYFPPHYFVTHTSN-GDKYEFNLVDGAVATVGDPALLSLS-VATKLAQVDPKFASIKSLNYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWILA-----IQQMTNAASSYMTDYYLSTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGEKLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.387e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + K R
Sbjct:  178 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 381          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.387e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 135/222 (60.81%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  SD G    F+LVDG VA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPMYFPPHYFITHTSD-GDIYEFNLVDGAVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWLLA-----IQQMTNAASSYMTDYYISTVFQAHHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 93/222 (41.89%), Postives = 137/222 (61.71%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAPT+FPPHY  T  S+ G    F+LVDG VA  ++P LL+IS ++ ++ + +P+F     ++ + ML+LSLGTGT  + +  Y A + +KWG   W+       I  + S  SS + D+++S  FQ+  S++NYLR+Q++ LTG    +D A+E NMQ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPTFFPPHYFATNTSN-GDKYEFNLVDGAVATVDDPALLSIS-VATKLAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWMLV-----IQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSKDNPE-----------TYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
BLAST of CX043997 vs. ExPASy Swiss-Prot
Match: PATM1_SOLTU (Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.118e-37
Identity = 92/222 (41.44%), Postives = 136/222 (61.26%), Query Frame = -3
Query:  151 NARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSKDNYLRIQDDTLTGDAASVDIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKFR 810
            +A++ DIC ST+AAP YFPPHY  T  S+ G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S++NYLR+Q++ LTG    +D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ K R
Sbjct:  177 DAKMYDICYSTAAAPIYFPPHYFITHTSN-GDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380          
The following BLAST results are available for this feature:
BLAST of CX043997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT3K1_SOLTU1.145e-3943.44Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PAT15_SOLTU1.400e-3741.44Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K3_SOLTU1.828e-3741.89Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 ... [more]
PATJ1_SOLTU2.387e-3741.44Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT06_SOLTU2.387e-3741.44Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K2_SOLTU3.118e-3741.44Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PATT5_SOLTU3.118e-3741.89Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PATM3_SOLTU3.118e-3741.44Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU3.118e-3741.44Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]
PATM1_SOLTU3.118e-3741.44Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G05-N10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043997 ID=CX043997; Name=CX043997; organism=Citrus sinensis; type=EST; length=827bp
CTTTATTTTAATAGTAATAATCTTATTAATTCGTAGAGTCCAATTGGAAG
CACTTTGTGTCGGATTGATTACACATAAAAACACGCATGCGGAATCCTTA
TGCCTTACTCAAATAAAACGAGTTTCAAATTATAAGACTTATTGGCGGCG
GCGGAACTTAAGTTGTTCAGAGAGTAATTTGGCAAAGTGAGCAAGTGCTT
CTTCATTTGTGACCTCTCCGTCAACCTTCTCATATCTGCCAGTCTCCAGG
TTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTCCAGTTTCCACAAG
CCTTTGCATATTCTCCTCCGTGGCAATGTCAACAGATGCTGCATCACCAG
TCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTTGCTTCCGCAGGAT
TGAAAGAGAGCAGACACATGGAAATCAACAATATCGGAGCTTCCATCAGA
GTAGATGTCGAGTATTGGGGTATTGCTATCTTCATAGATCCATTCGAAAA
TGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAATTCTTTCTTGGCT
GTACCTGTGCCTAGTGATAGTACCAGCATATCTCTACCGTCCATTGGGTT
TTTGTCCCTGAACTGGGGGTTCTGCTTCACCATTTCCTTCGATATGTGGC
TTATTGCCAATAGGGTAGGATTATTAGCAGCAACTCCACCGTCAACAAGA
TCAAAAGTGCGGGTTCCGCCACTGTCACTGTCCTTAGTCTCCAAGTAGTG
AGGTGGGAAGTAAGTGGGCGCTGCAGAAGTGCTGATGCATATATCAGCCA
GCCGAGCATTCTTCAAAACGTTCTCTT
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