CX043996

Overview
NameCX043996
Unique NameCX043996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25
Identity = 68/162 (41.98%), Postives = 91/162 (56.17%), Query Frame = 3
Query:  210 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFA---PKMVACHIMPYPYAIFYCH 686
            H DP+  +FF  KDL  G+TM ++F     +A  + LPR EAD++PFS +++P +L  FS    S  A  M  TL  CE PP +GE K CATSLESM+DF   T  L T      +T + K  +  Q YT+  V +        ++VACH  PY YA+F CH
Sbjct:  205 HDDPNVALFFLEKDLHPGKTMAVHFTAT--TAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDF--ATSSLGTSHVRAASTVVGKEGSPEQEYTVTAVKRAAAGGDQDQLVACHAEPYAYAVFACH 362          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 64/162 (39.51%), Postives = 94/162 (58.02%), Query Frame = 3
Query:  216 DPSTMVFFTLKDLKIGETM--PIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTK---STTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCH 686
            DP   +FF  K+L+ G+ +   ++F     +   + LPR +ADSIPFS K+LP +L  F     S  A  M  TL  CE+P  +GE K CATSLES++DFV  +FG  +     +T  L+K   S+++ Q+YT+  V +     +++ACH   YPYA+F CH
Sbjct:  357 DPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFG-ASDVDAASTVVLSKAVESSSLAQDYTVSGVRRMAGTGQLIACHPESYPYAVFMCH 517          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 3
Query:  222 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689
            +T VFF  + +++G  +P +F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++   G  G      V +T  L ++    Q YT++ V      P  VACH   YPY ++ CH+
Sbjct:  138 TTTVFFHEEAVRVGRRLPFHFPPATPAALG-FLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTST--LPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHT 290          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.090e-21
Identity = 65/159 (40.88%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  216 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQV-PKPMFAPKMVACHIMPYPYAIFYCHS 689
            D    VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE  P  GE K CATSLESM++F   + G       ++T       T  Q Y +  V P P+    MVACH M Y YA+F CH+
Sbjct:   22 DTVNNVFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTR-DVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHT 177          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 58/156 (37.18%), Postives = 84/156 (53.85%), Query Frame = 3
Query:  222 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689
            +T VFF  + +++G+ +P  F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++      G      V +T  L ++    Q YT+  V      P  VACH   YPY ++ CH+
Sbjct:  165 TTTVFFHEEAVRVGKRLPFRFPPATPAALG-FLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTST--LPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHT 317          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21
Identity = 63/165 (38.18%), Postives = 84/165 (50.91%), Query Frame = 3
Query:  210 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQA-LPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQV-LNTTFLTKSTTIFQNYTILQV-PKPMFAPKMVACHIMPYPYAIFYCHSQM 695
            H DP+  +FF  KDL  G+ M + F   D      A LPR EA+++PF  ++    L+ FS    S  A+ M+ T+  CE   + GE K CATSLESM+DF     G   K+ V   +T + K     Q Y I     K +   K V CH   YP+A+FYCH  M
Sbjct:  168 HDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG---KYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAM 329          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 60/159 (37.74%), Postives = 87/159 (54.72%), Query Frame = 3
Query:  216 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLT--KSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCH 686
            DP+  +FF   +L+  +++ ++F      A  + LPR EAD++PFS K L  +L  F     S  A  ++ TL  CE+P  +GE K CATSLESM+DFV  + G  T+     +TFL      T  Q YT+    +     +++ACH   YPYA+F CH
Sbjct:  103 DPTMGLFFLETNLQSSKSIKLHFANM--MAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLG--TRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCH 257          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 57/156 (36.54%), Postives = 81/156 (51.92%), Query Frame = 3
Query:  222 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAPKMVACHIMPYPYAIFYCHS 689
            +T VFF  + +++GE +P YF     SA    LPR  ADSIPF+   LP +L  F  + D+  A  M  TL  CE P + GE+K CATSLE++++      G      + +T  L +     Q Y +  V  P+     VACH   YPY ++ CH+
Sbjct:  186 TTTVFFHEEAVRVGERLPFYFPAATTSALG-FLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALAST--LPRGGAPLQAYAVRAV-LPVEGAGFVACHDQAYPYTVYRCHT 337          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 63/158 (39.87%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  231 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGET----KICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQVPKPMFAP--KMVACHIMPYPYAIFYCH 686
            VFF  KDL  G  M ++F +    A    LPR  A+S+PF+ ++LP +L   S    SP A AM  TL  CE   + GET      CATSLESM++FV  + G      V      T + T  Q Y + +  +P+  P   MVACH MPY YA+F  H
Sbjct:   64 VFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLGTRDVHAVSTEVISTLTPTPRQAYRV-EAVRPVAVPGGDMVACHGMPYAYAVFGLH 218          
BLAST of CX043996 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.473e-18
Identity = 63/158 (39.87%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  231 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGET-----KICATSLESMLDFVHGTFGLETKFQVLNTTFLTKSTTIFQNYTILQV-PKPMFAPKMVACHIMPYPYAIFYCH 686
            VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE   I  ET       CATSLESM++ V  + G      V          T  Q Y +  V P P+    MVACH MPY YA+F  H
Sbjct:   66 VFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLGTRDVHAVSTEVVNRAGPTPRQAYRVEAVRPVPVPGGDMVACHRMPYAYAVFGVH 221          
The following BLAST results are available for this feature:
BLAST of CX043996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BURP3_ORYSJ2.123e-2541.98BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPH_ORYSJ6.828e-2439.51BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RAF1B_WHEAT1.987e-2337.82Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURP6_ORYSJ1.090e-2140.88BURP domain-containing protein 6 OS=Oryza sativa s... [more]
RAF1A_WHEAT1.424e-2137.18Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
RD22_ARATH7.066e-2138.18Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP5_ORYSJ3.507e-2037.74BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPD_ORYSJ1.333e-1936.54BURP domain-containing protein 13 OS=Oryza sativa ... [more]
BURP1_ORYSJ2.273e-1939.87BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.473e-1839.87BURP domain-containing protein 2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G04-N8-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043996 ID=CX043996; Name=CX043996; organism=Citrus sinensis; type=EST; length=711bp
AATCTCTTCTCTTTCTGCTTCACTTGTTATCTGTGTTTCCTCTCCCTGAA
AAAAAAACATTACTAAAATACATAAGAAACTTCGATAATAGAAAAGAGAT
GGGGTTAAGATTTTCAGCTTGGAACCTCCTTCTTTCTCTACTCTTTCTGT
GTGCTCCGGTGCTTTCGGAGAATCTTCATGATTCTCATTCAATACCATCC
CACATGAATCACATGGACCCTTCAACGATGGTATTCTTCACCTTGAAGGA
TCTAAAGATTGGCGAAACGATGCCGATTTATTTTCGCAAGAGAGATCCTT
CAGCTTATCCTCAGGCTTTGCCTAGAGAAGAAGCAGATTCCATTCCATTT
TCATTGAAACAACTGCCTTACCTTCTTCAATTCTTCTCGTTCTCAGATGA
CTCACCCCTAGCCAAAGCCATGGAAGGGACCCTGAATCATTGCGAAGTTC
CTCCCATCGAAGGAGAAACCAAAATTTGTGCTACCTCTTTGGAATCCATG
CTTGATTTTGTACACGGAACTTTCGGATTGGAGACCAAATTCCAAGTTCT
AAACACAACATTTCTCACAAAATCAACTACCATTTTCCAAAATTACACTA
TTTTACAAGTGCCTAAACCAATGTTTGCTCCCAAGATGGTGGCATGTCAT
ATCATGCCTTACCCTTATGCAATCTTCTACTGCCACAGCCAAATGACTGA
GAACAAGTTAT
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